Gene Information

Name : Q7A_1450 (Q7A_1450)
Accession : YP_006295925.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.11
Position : 1462167 - 1463222 bp
Length : 1056 bp
Strand : +
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGCGTGATGTTATTGATGGTAAAACACCAGGAGCTTTTTACAGTCGCTATGGCCTGAATCCAACCATCATGGCGCTGGA
AGGTAAACTGGCTCAACTCGATCATGCCGAGGCCAGTTTGGCCTTTTCTTCTGGCATGGCGGCAATCTCTGCCTTGTTCA
TGCGGTTTGCTGCTCAGGGTATTTTATGTCTGGGAGATGTCTATGGCGGTACTAAACAGCTTTTAACCAGACAGCTTCCG
GAACTTGGTATAAAGACGTTTTCGCTGAGCCAGACTGATCTGGACTCGGTGGAAACAGCCATAAAAACGCATCAACCTCG
TTTGGTTTATCTCGAATCGCCAAGTAACCCGACATTGCAGCTACAAAACATCAGTGGGCTGGCTGAGCTAGCTCATGCGA
ATGGTGCTTTATTAGCTGTGGACAATACGTTTGCTACGCCTATTAATCAGTGCCCGATTGACCTGGGGGCTGATTTTACT
GTGCAAAGTGCCACCAAATACCTGGGAGGTCATAGCGATTTAACCGCAGGGGTATTGTCTGGGTGTCGTTTGGAGTTGGA
TTATATCAATGCGTGGCGTAAAAACCTTGGTCAGACGATTGCGACCGAAGTTGCACATAAGCTGTCTCGTAGTCTGCTCA
CTTTGGCGCTTAGGGTAGAACGGCATAATGATAATGCCCAGCTTATCGCTGATTATCTGGATGCGCATTCCAAGGTGCGT
AAAACCTGTTATCCCGGGTTGGCTTCACATTCACAACATATGCTTGCTAAACAGCAAATGTCCGGTTTTGGCGGGATGGC
CAGTTTTTATATCGCTGGTGATGGCTCCATGGCTGAGCGTTTTATCGATTTGTTGAAAGTCTTTTCCATTGCACCGAGTC
TGGGTGGTGTTGAGAGTCTGGCGACTCAACCGATATATACGTCGCATTATGGCTTGTCTGAAGAGATATTGAGACAAGCC
GATGTTGACGGCAGTTTGATTCGGCTCTCAATTGGCTTGGAAGATATAAACGATTTAATTGACGATCTGGAACAGGCTTT
TAGTCTTTGTCAGTGA

Protein sequence :
MRDVIDGKTPGAFYSRYGLNPTIMALEGKLAQLDHAEASLAFSSGMAAISALFMRFAAQGILCLGDVYGGTKQLLTRQLP
ELGIKTFSLSQTDLDSVETAIKTHQPRLVYLESPSNPTLQLQNISGLAELAHANGALLAVDNTFATPINQCPIDLGADFT
VQSATKYLGGHSDLTAGVLSGCRLELDYINAWRKNLGQTIATEVAHKLSRSLLTLALRVERHNDNAQLIADYLDAHSKVR
KTCYPGLASHSQHMLAKQQMSGFGGMASFYIAGDGSMAERFIDLLKVFSIAPSLGGVESLATQPIYTSHYGLSEEILRQA
DVDGSLIRLSIGLEDINDLIDDLEQAFSLCQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 8e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_1450 YP_006295925.1 methionine gamma-lyase BAC0207 Protein 5e-47 41