Gene Information

Name : Q7C_745 (Q7C_745)
Accession : YP_006292603.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine 4,6-dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 794439 - 796394 bp
Length : 1956 bp
Strand : -
Note : PFAM: Polysaccharide biosynthesis protein

DNA sequence :
GTGCGTCGTTTAGCTCTTCGATTAAGTGACTGGTTTTTAGCTCGGCCACGCATGGTCAAGCGACTGATCACGTTGTCCGT
TGATTATACTGCGGTGATGCTGGCTTTATGGCTGGCCTATTGCCTCAGACTGAGCACGATTTATACCCCGCCGCCGCAGC
AATGGTGGTTATTCCTGCTGTCGCCGCTGTTAGCAATACCTGTTTTTGCTCGCTTCGGGCTTTATCGCACGGTGATTCGC
TATATTGGCCTCGATGCCATTTGGGCAATATTAAAAGCTATCACTCTCTATACTCTCATTCTTGCTGTGGTCATTTTATT
AGCAAGAGAATATGCGGGTTTGGTTCCCAGAACCATTTATGCGATCAACGCGATTTTGCTGGTTTTGATGATCGGTGGCA
GCCGTATCATGGCGCGTTGGGCGTTTACCCGTCAGCAAATTTCCTCTGAGCAACGTCGAAAACAAGCTGAGTTTTTGCCG
CCGGTGATTATTTATGGTGCGGGTGCAGCCGGTGCCCAATTGGCGGCGATATTAAAAATGGGTAATCAATTACGGCCCGT
TGCTTTTATCGATGACGATCAAACTTTGCATCATCAACAAATTAATGGACTAACCGTCTATGCGCCCAGCGCATTGTCGA
GCTTGATTAAGCGCTTTGAAACAGCAGAATTACTGTTGGCCATGCCCTCGGTATCTCGTCGACAACGTCAGCAGATTTTA
CAGACACTGGAGAGCTATCCTGTCCGGATTCGCACCTTGCCGGGCATGAGCGAAATCGCGCAGGGCAAAATCAGTGTTTC
GGATATTCGCGAGGTGGAAATCGGCGACTTACTTGGTCGTGAGCCAGTGGCGCCAGATACCGTGTTGTTAACGCGTAATA
TCACCGATAAAACCGTCATGGTTACCGGGGCTGGGGGATCGATTGGCAGTGAGCTGTGCCGGCAGATTATTCAGCAGCAG
CCGAGACAACTGGTGCTGTATGAAATCAGCGAATATGCCCTTTATGAAATCGAAAAATCGTTGCACCACCTGGGACGTGA
TGTACCGATTGTCAGCCTGTTAGGGTCGGTGCTGGATAAAAATCGGTTGCAAAAGGCCTGTCAGCATTTTGGTGTGCAAA
CGATTTATCATGCCGCTGCCTACAAGCATGTGCCGATGGTGGAAAAAAACATCACGGAAGGGGTGCGTAATAATGTGTTA
GGGACACTGAACACGGCATTGGCAGCGATGGCAGCTGAAGTCGAAACGATGGTATTGATTTCGACTGACAAAGCGGTGCG
GCCAACGAATACCATGGGCGCAAGTAAGCGATTTGCTGAATTGATTTTACAGGCGCTGGCGACCAATGAACCGCAATCAG
CCACCCGTTTTACCATGGTCCGATTTGGTAATGTGCTTGGCTCGTCAGGTTCGGTCATCCCCTTATTTCGCCAGCAAATT
GCCAATGGTGGGCCGGTCACAGTCACGCATCCTGACATCATCCGCTACTTTATGACCATTCCCGAAGCCGCGGAGTTGGT
TATTCAGGCTGGGGCGATGGGTGAGGGCGGAGATGTGTTTGTGCTGGATATGGGTGAGCCGGTAAAAATCATAGATTTGG
CGCGCCGATTGGTGCATCTCAGTGGTTTGTCGATCCGAGACGAAACCCGACCTGACGGCGACATTGAAATTCAGTTTACC
GGTTTACGGCCCGGTGAAAAGCTCTATGAAGAATTGCTGATTGGCAGTCATGTTGCTGTTACCAGACACCCTAAAATCAT
GCGTGCCGAAGAACAGGTGATTATCTGGCCGGTATTGCAGGACATTCTGGACCAACTGTCGGCAGCGATTGAACAGGACG
ATTACGGCCAGATTCGTGCTTTGTTGCTGACGCATATTGATGGTTTTACGCCGCAATCCGATCCAGAAGATTGGTTGCAG
AGTCAGCAGGCGATGTCAGCGTCAGGTCAGGTATAA

Protein sequence :
MRRLALRLSDWFLARPRMVKRLITLSVDYTAVMLALWLAYCLRLSTIYTPPPQQWWLFLLSPLLAIPVFARFGLYRTVIR
YIGLDAIWAILKAITLYTLILAVVILLAREYAGLVPRTIYAINAILLVLMIGGSRIMARWAFTRQQISSEQRRKQAEFLP
PVIIYGAGAAGAQLAAILKMGNQLRPVAFIDDDQTLHHQQINGLTVYAPSALSSLIKRFETAELLLAMPSVSRRQRQQIL
QTLESYPVRIRTLPGMSEIAQGKISVSDIREVEIGDLLGREPVAPDTVLLTRNITDKTVMVTGAGGSIGSELCRQIIQQQ
PRQLVLYEISEYALYEIEKSLHHLGRDVPIVSLLGSVLDKNRLQKACQHFGVQTIYHAAAYKHVPMVEKNITEGVRNNVL
GTLNTALAAMAAEVETMVLISTDKAVRPTNTMGASKRFAELILQALATNEPQSATRFTMVRFGNVLGSSGSVIPLFRQQI
ANGGPVTVTHPDIIRYFMTIPEAAELVIQAGAMGEGGDVFVLDMGEPVKIIDLARRLVHLSGLSIRDETRPDGDIEIQFT
GLRPGEKLYEELLIGSHVAVTRHPKIMRAEEQVIIWPVLQDILDQLSAAIEQDDYGQIRALLLTHIDGFTPQSDPEDWLQ
SQQAMSASGQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 2e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7C_745 YP_006292603.1 UDP-N-acetylglucosamine 4,6-dehydratase VFG0029 Protein 4e-121 50