Gene Information

Name : Q7C_671 (Q7C_671)
Accession : YP_006292529.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Resistance
Product : Ethidium bromide-methyl viologen resistance protein EmrE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 723564 - 723896 bp
Length : 333 bp
Strand : +
Note : PFAM: Small Multidrug Resistance protein

DNA sequence : 
ATGTCGAAATGGTTACTGCTCAGTGCAGCCATCATTGCTGAAGTCTTTGGTACCAGTTTTCTTAAAGCTTCGGAAGGTTT
TACCCGACTTTGGCCTTCCTTGGCTGTCATTGTTGGCTATGCCATCGCATTTTATTTTTTATCACTCAGTTTAAAAGTGA
TTCCGGTCGGTATTGCTTATGCTATCTGGGCAGGTGCCGGCGTCGTACTCATCGCACTTATTGGCTGGCTGGCGTTTGGT
CAAACCCTGGATGTACCGGCATTGATTGGTATCAGTCTGATTGTCGCCGGTGTTCTGATACTGAACCTGTTTTCAAACAG
CATCTCTCACTAA

Protein sequence : 
MSKWLLLSAAIIAEVFGTSFLKASEGFTRLWPSLAVIVGYAIAFYFLSLSLKVIPVGIAYAIWAGAGVVLIALIGWLAFG
QTLDVPALIGISLIVAGVLILNLFSNSISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 4e-21 59
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-21 59
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 4e-21 59
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 6e-21 59
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 4e-21 59
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 4e-21 59
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 6e-21 59
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 4e-21 59
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-21 59
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 6e-21 59
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-21 59
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 6e-21 59
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-21 59
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 6e-21 59
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-21 59
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 4e-21 59
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 4e-21 59
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 4e-21 59
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-21 59
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 4e-21 59
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 5e-13 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0322 Protein 3e-25 60
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0324 Protein 4e-24 59
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE CP001138.1.gene1489. Protein 5e-23 59
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0323 Protein 2e-21 59
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0150 Protein 2e-23 57
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0002 Protein 9e-23 57
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE NC_010410.6003348.p0 Protein 9e-23 57
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE NC_002695.1.913273.p Protein 3e-23 56
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE CP004022.1.gene1549. Protein 2e-21 56
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0377 Protein 3e-21 53
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0140 Protein 8e-19 50
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0192 Protein 1e-17 49
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0325 Protein 8e-18 48
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE AE000516.2.gene3301. Protein 3e-11 47
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0249 Protein 3e-11 47
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0139 Protein 3e-15 46
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0327 Protein 4e-17 46
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0329 Protein 1e-15 45
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0326 Protein 5e-15 44
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE BAC0321 Protein 1e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7C_671 YP_006292529.1 Ethidium bromide-methyl viologen resistance protein EmrE VFG1587 Protein 2e-13 44