Gene Information

Name : Q7C_585 (Q7C_585)
Accession : YP_006292444.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 642177 - 643586 bp
Length : 1410 bp
Strand : -
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I

DNA sequence :
ATGTCAGTCGAAAATGTTTTACAGATGATCAAGGACGAAGAAGTCAAATTCGTCGATTTCCGTTTTACCGACACTCGTGG
TAAAGAACAGCATGTTTCTTATCCGGCGCATGGTATTGATGAAGATACCTTTTCTGAAGGTGTGATGTTTGACGGTTCAT
CTGTTGCTGGCTGGAAAGGAATTAATGAATCAGACATGATTCTGATGCCGGACCCGGAAACGGCCGTGTTAGACCCTTTC
ATGGATGACATTACCTTAATCATTCGTTGCGACATCGTTGAACCAGCGACAATGCAAGGCTATGAACGTGATCCCCGCAG
TGTTGCTAAGCGGGCGGAAGCTTACTTGCAATCTACCGGCATGGCCGATGTCGCTTATTTTGGCCCAGAACCGGAATTCT
TCATCCTTGATGATGTGCGTTGGGGCAGTAATATTTCAGGGTCTTTCTACAAAATTGATTCGGATGAGTCTTCGTGGAAT
ACCGAAAAAGTCTTCCCTGATGGCAACAAAGGTCACCGCCCAAGTGTGAAAGGCGGCTATTTCCCTGTACCCCCCGTCGA
CTCTTTGCAAGATATCCGTTCAGCAATGTGTCTGACCATGGAAGAAATGGGGCTGGTAACTGAAGTACATCACCATGAAG
TGGCGACAGCGGGGCAGTGTGAAATCGGCACCAAATTCAACACGTTAGTCAAAAAAGCTGACGAAGTACAGATTTTGAAA
TATGTCGTTCACAATGTTGCGCACGTTTACGGTAAAACAGCGACCTTTATGCCAAAACCATTAGTCGGTGACAATGGTAG
TGGTATGCATGTTCACCAATCCATTGCTAAAGATGGTGATAATTTGTTTACTGGTAACAAGTACGGTGGTCTGTCAGAAA
CAGCGTTGTACTATATCGGCGGTATTATCAAACATGCCCGTGCGCTTAATGCCTTTACTAACTCCAGCACCAATAGCTAC
AAACGCCTGGTACCGGGCTTTGAAGCCCCGGTCATGCTGGCTTATTCAGCACGAAATCGTAGTGCGTCAATCCGTATTCC
TTTTGTCAGTAACCCTAAAGGACGCCGTATCGAAGTGCGTTTCCCAGATCCTTCAGCAAACCCTTATCTGGCATTCAGTG
CCATGTTGATGGCGGGTCTTGATGGCATTAAAAACAAGATCCACCCGGGCGATGCGATGGATAAAGACTTGTACGATTTG
CCGCCAGAAGAATCTGCAAATATCCCGACAGTATGTCATGCGCTGGATCAAGCATTGAATGCTTTGGATCAAGATCGTGC
CTTTCTGACTGAAGGCGGTGTTTTCACCGACGATATGATTGATGGTTATATCGCGCTGAAAATGGAAGAAGTCACCCGTC
TGCGTATGGAAACACATCCTGCTGAGTTTGATCTGTACTACAGTGTCTAA

Protein sequence :
MSVENVLQMIKDEEVKFVDFRFTDTRGKEQHVSYPAHGIDEDTFSEGVMFDGSSVAGWKGINESDMILMPDPETAVLDPF
MDDITLIIRCDIVEPATMQGYERDPRSVAKRAEAYLQSTGMADVAYFGPEPEFFILDDVRWGSNISGSFYKIDSDESSWN
TEKVFPDGNKGHRPSVKGGYFPVPPVDSLQDIRSAMCLTMEEMGLVTEVHHHEVATAGQCEIGTKFNTLVKKADEVQILK
YVVHNVAHVYGKTATFMPKPLVGDNGSGMHVHQSIAKDGDNLFTGNKYGGLSETALYYIGGIIKHARALNAFTNSSTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPFVSNPKGRRIEVRFPDPSANPYLAFSAMLMAGLDGIKNKIHPGDAMDKDLYDL
PPEESANIPTVCHALDQALNALDQDRAFLTEGGVFTDDMIDGYIALKMEEVTRLRMETHPAEFDLYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-112 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7C_585 YP_006292444.1 glutamine synthetase VFG1399 Protein 1e-113 52