Gene Information

Name : Q7C_54 (Q7C_54)
Accession : YP_006291926.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Virulence
Product : Aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 51939 - 53459 bp
Length : 1521 bp
Strand : +
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGATTTATGCAAAACCTGGAACAGACAACGCGGTCGTCACTTTCAAACACCGCTACGAAAACTTTATTGGTGGTGACTG
GGTTGCACCGGTCAAAGGCCAGTATTTTGAAAACATTACACCGGTAACCGGTGAAGTTATCTGTGAAATACCTCAGTCCA
GTGCAGAAGATGTTGAGTTAGCGCTAGATGCTGCGCACAAGGCCAAAGATGGCTGGGGACGCACTTCCGTCGCTGATCGC
AGCCGAATTTTATTACAAATTGCCGATCGCATCGAAGCAAATCTTGAAATGCTGGCGGTTGCCGAGACATGGGATAACGG
TAAAGCGGTTCGAGAAACACTCAATGCTGATATTCCCTTGGCAGCGGACCATTTTCGCTACTTTGCTGGCTGCATTCGTG
CTCAGGAAGGGACGATGGGTGAAATTGATGACAGTACCGTCGCCTATCACTTTCATGAGCCGTTAGGGGTTGTTGGTCAG
ATCATACCTTGGAACTTTCCGATACTCATGGCTGCGTGGAAGTTAGCACCGGCCCTCGCAGCTGGTAACTGCATCGTCTT
GAAACCAGCAGAGCAGACGCCGGTTTCAATTTTAAAAGTCATGGAAGTCATCGCAGACATACTACCGCCGGGTGTTTTGA
ATATCGTTAATGGATTTGGCCGTGAAGCCGGCCAGGCACTGGCAACCAGCACGCGAATTGCCAAAATTGCCTTTACTGGT
TCAACGCCGGTAGGTTCGATGATCATGAAATACGCCGCAGACAACATTATCCCCTCCACGGTTGAGTTGGGCGGTAAGTC
GCCAAATGTCTTTTTCGAAGATATTATGCAGCAGGAAGAAGATTACATAAGCAAGTGTGCCGAAGGTATGACACTGGCTT
TCTTTAATCAAGGTGAGGTTTGCACCTGCCCTTCTCGTGCGGTTATCCAAGAGAGCATCTATGATGACTTTATTGCGGTA
GTGATGAAACGTGCACAGCAAATCAAGCGGGGTAATCCACTTGATACAGAAACCCAAGTGGGGGCACAAGCCTCACAGGA
GCAGTTTGAAAAAATCCTGAGCTATGTCGATATTGGCAAAAACGAGGGCGCACAGTTATTGATGGGAGGAGGAATTCAAC
AGGTTGGCGCCGAATTCGACAAAGGTTTTTATATCGAGCCAACGCTGATGAAAGGCCATAATAAAATGCGCATTTTCCAA
GAAGAAATTTTCGGTCCGGTTGTGTCTGTGACGACGTTTAAAACCGAAGCCGAAGCACTGGAGATTGCCAATGATACTGA
GTTTGGACTTGGTGCTGGTGTTTGGACGCGTGATATGAATCTGGCTTATCGTATGGGGCGTGGTATTCAGGCTGGCCGAG
TCTGGACAAATTGCTACCATGCCTATCCTGCCCATGCGGCATTTGGTGGCTACAAAAAATCTGGTGTTGGCCGTGAAACG
CATAAAATGGTACTTGAGCATTATCAGCAAACAAAAAATCTGCTGGTCAGTTACAGCACCAGCCCTCTTGGTTTTTTCTG
A

Protein sequence :
MIYAKPGTDNAVVTFKHRYENFIGGDWVAPVKGQYFENITPVTGEVICEIPQSSAEDVELALDAAHKAKDGWGRTSVADR
SRILLQIADRIEANLEMLAVAETWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGTMGEIDDSTVAYHFHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCIVLKPAEQTPVSILKVMEVIADILPPGVLNIVNGFGREAGQALATSTRIAKIAFTG
STPVGSMIMKYAADNIIPSTVELGGKSPNVFFEDIMQQEEDYISKCAEGMTLAFFNQGEVCTCPSRAVIQESIYDDFIAV
VMKRAQQIKRGNPLDTETQVGAQASQEQFEKILSYVDIGKNEGAQLLMGGGIQQVGAEFDKGFYIEPTLMKGHNKMRIFQ
EEIFGPVVSVTTFKTEAEALEIANDTEFGLGAGVWTRDMNLAYRMGRGIQAGRVWTNCYHAYPAHAAFGGYKKSGVGRET
HKMVLEHYQQTKNLLVSYSTSPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-156 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-165 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-165 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-165 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-165 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7C_54 YP_006291926.1 Aldehyde dehydrogenase VFG0082 Protein 2e-156 66