Gene Information

Name : Q7C_2039 (Q7C_2039)
Accession : YP_006293865.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Virulence
Product : Thiol peroxidase, Tpx-type
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.15
Position : 2047375 - 2047869 bp
Length : 495 bp
Strand : +
Note : PFAM: Redoxin

DNA sequence : 
ATGGCCACGGTAACATTAAAAGGTAACCCGATTGAAACCGTAGGTGAGTTACCTGAAGTAGGCAGTCAGGCACCAGGCTT
TAATTTGGTAAAAGATGATTTGTCTGAGCTAACCGGGCAAGATATTTCAGGTAAAGTTGTTCTGAATATTTTTCCATCCG
TTGATACCGGCACCTGTGCTATGTCGGTGCGCCAGTTCAACAGCAAGGCGGCAGCACTGGATAATACCACTGTTGTCTGT
GTCTCCAAAGACTTACCATTTGCACTCAGTCGTTTCTGTGGGGCAGAGGGACTGAATGACGTTGTCGTTGGTTCTGCATT
TCGTAGCAGTTTTGGCGATGATTACGGTGTAACTTTTACATCCGGTCCGTTGACCGGGTTACTGTCACGCGCTGTGGTCG
TCATTGATGAGCAAGGTAAGGTAATTTATACCCAGCAGGTTGCGGAAACTGCTGACGAGCCTGATTATGACGCAGCACTT
AATGCGCTGAGTTGA

Protein sequence : 
MATVTLKGNPIETVGELPEVGSQAPGFNLVKDDLSELTGQDISGKVVLNIFPSVDTGTCAMSVRQFNSKAAALDNTTVVC
VSKDLPFALSRFCGAEGLNDVVVGSAFRSSFGDDYGVTFTSGPLTGLLSRAVVVIDEQGKVIYTQQVAETADEPDYDAAL
NALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 6e-31 42
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 9e-31 42
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-31 42
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7C_2039 YP_006293865.1 Thiol peroxidase, Tpx-type VFG0087 Protein 2e-31 42