Gene Information

Name : Q7C_1860 (Q7C_1860)
Accession : YP_006293688.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 1872646 - 1873575 bp
Length : 930 bp
Strand : -
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence : 
ATGAAAGACGCCTTGGTGCGTATCGCGACGCGTCGTAGTCCGCTAGCCGTCTGGCAGGCGGAGTTTGTCCGTGATGCGCT
GTTAGCCATGCACCCGCATCTGACTATTGAGTTAGTTAAAATCAAAACAAAAGGCGACAAAATTCTGGATACGCCATTGG
CAAAAGTGGGCGGCAAAGGCTTATTTGTCAAGGAGCTTGAAGTGGCCATGCAAGAAGGCGAGGCAGATATTGCGGTCCAT
TCCATGAAAGATGTGCCAGTCGCTTTTCCGGATGGGCTGCATTTACCTGTGATTTGTGCTCGGCATGACCCTTTTGATGC
GTTTGTTTCGAATCATTATGCCAATGTCGATGATCTGCCTGAAGGCGCGGTCGTGGGAACATCAAGCCTGCGCCGTGAAT
GTCAGTTGCGACATTATCGGCCAGATCTGCAGATTAAACCGTTGCGCGGCAATGTTAATACCCGTTTGGCAAAACTGGAT
GCCGGTGAGTTTGATGCCATCGTTTTAGCCAAAGCCGGTCTGGAACGACTCGAGTTTCATGATCGTATTCGCTGTGCCTT
AACGGCAGAACAAAGTTTGCCGGCAATTGGTCAGGGTGCATTGGGTATTGAGACCCGCATCGATGATGCCGAACTAAACG
CATTAATTGCGCCTTTGGCCTGCCCAGATACGACCATTACGGTCAAAGCAGAGCGAGCCTTGAATCGTCGTTTGCAAGGG
GGGTGTCAAGTGCCCATCGGCGGATATGCCGTATTGGAGGATGGACAAATCTGGTTGCGAGGTCTGGTTGGCCGACCTGA
TGGTTCAGAAATGTTGTTTGATGATATTCAAGGTGCCGCGGACCAAGCTGAAGCGTTGGGCTTAACGTTGGCGGATAGTT
TGCTTGCGCAAGGTGCTGACGCCATTTTGTCGGATGTTTATGACCGCTGA

Protein sequence : 
MKDALVRIATRRSPLAVWQAEFVRDALLAMHPHLTIELVKIKTKGDKILDTPLAKVGGKGLFVKELEVAMQEGEADIAVH
SMKDVPVAFPDGLHLPVICARHDPFDAFVSNHYANVDDLPEGAVVGTSSLRRECQLRHYRPDLQIKPLRGNVNTRLAKLD
AGEFDAIVLAKAGLERLEFHDRIRCALTAEQSLPAIGQGALGIETRIDDAELNALIAPLACPDTTITVKAERALNRRLQG
GCQVPIGGYAVLEDGQIWLRGLVGRPDGSEMLFDDIQGAADQAEALGLTLADSLLAQGADAILSDVYDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-82 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-82 61