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Name : Q7C_176 (Q7C_176) Accession : YP_006292044.1 Strain : Methylophaga sp. JAM7 Genome accession: NC_017856 Putative virulence/resistance : Unknown Product : tmRNA-binding protein SmpB Function : - COG functional category : - COG ID : - EC number : - Position : 178177 - 178656 bp Length : 480 bp Strand : + Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGGCAGCGAAAAAAAAACCACAACACGACGACAATACCATCGCCCAAAACCGCAAGGCGAGGCACGAATTTTTTATTGA AGAGAAATTCGAGGCCGGGCTGGTTTTAGAAGGCTGGGAAGTAAAAAGCCTGCGTGAAGGAAAATGTCAGCTCAGTGACA GTTATGTTTTGTTACGCGATGGCGAAGCCTGGCTATCCAATGCGCTGGTTACCGCGCTTAAAACGGCTTCAACACACATT GTGCCCCGCCCGCAGCGAGACCGAAAGCTCCTTTTGAAAAAGCCCGAGCTCAATAAACTCATCGGCGCTGTGGAGCGAAA AGGCTATACCCTCATTCCCCTCAGCATGTACTGGAAACGCGGTAATGCCAAACTGCAAGTCGCTCTCGCCAAAGGCAAAC AAAGTCATGATAAACGGGCAACCATAAAAGAACGCGATTGGCAGCGAGATAAAGCCCGATTATTTAAACAACTCAACTAA Protein sequence : MAAKKKPQHDDNTIAQNRKARHEFFIEEKFEAGLVLEGWEVKSLREGKCQLSDSYVLLRDGEAWLSNALVTALKTASTHI VPRPQRDRKLLLKKPELNKLIGAVERKGYTLIPLSMYWKRGNAKLQVALAKGKQSHDKRATIKERDWQRDKARLFKQLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 9e-33 | 53 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 7e-16 | 44 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 6e-18 | 43 |
