Gene Information

Name : Q7C_1716 (Q7C_1716)
Accession : YP_006293550.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1721071 - 1721379 bp
Length : 309 bp
Strand : +
Note : PFAM: Transposase

DNA sequence :
ATGACAAAACAAAGAAGAAGTTTTACCCCTGAGTTCAAGCTGGAAGCAGCCAGTCTAGTTGTCGACCAGAACTACAGCGT
TACAGAAGCTTGCAAAGCGCTGGATGTTGGCGAGTCAGCCCTGCGGCGGTGGGTTAAACAATTAGAAGCAGAGCGTGGTG
GAAGTACCCCAGTATCAAAAGCTCTGACGCCTGAACAACAGCGTATTCAGGAGCTGGAAGCCCGTGTTAAACGTCTGGAG
CAGGACAAAACCATATTAAAAAAGGCTACCGCTCTCTTGATGTCGGACGAACTCGGCTCTACACGCTGA

Protein sequence :
MTKQRRSFTPEFKLEAASLVVDQNYSVTEACKALDVGESALRRWVKQLEAERGGSTPVSKALTPEQQRIQELEARVKRLE
QDKTILKKATALLMSDELGSTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 1e-32 74
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 9e-24 59
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 9e-24 59
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 9e-24 59
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 9e-24 59
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 9e-24 59
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-23 59
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 9e-24 59
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-23 59
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 5e-22 58
l7045 CAD33744.1 - Not tested PAI I 536 Protein 2e-23 57
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 2e-23 57
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 6e-25 57
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 4e-25 57
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 1e-23 56
unnamed AAC31483.1 L0004 Not tested LEE Protein 9e-24 56
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 1e-23 56
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 1e-23 56
api80 CAF28554.1 putative transposase Not tested YAPI Protein 2e-18 55
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 4e-23 54
ORF SG13 AAN62235.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-18 47
trp1329A CAB46577.1 IS1329 transposase A Not tested HPI Protein 9e-19 47
tnpA CAB61575.1 transposase A Not tested HPI Protein 2e-18 46
unnamed CAD42047.1 hypothetical protein Not tested PAI II 536 Protein 9e-14 43
unnamed CAD33780.1 putative transposase Not tested PAI I 536 Protein 9e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7C_1716 YP_006293550.1 transposase IS3/IS911 VFG1123 Protein 4e-24 59
Q7C_1716 YP_006293550.1 transposase IS3/IS911 VFG1553 Protein 2e-22 58
Q7C_1716 YP_006293550.1 transposase IS3/IS911 VFG1485 Protein 9e-24 57
Q7C_1716 YP_006293550.1 transposase IS3/IS911 VFG0784 Protein 4e-24 56
Q7C_1716 YP_006293550.1 transposase IS3/IS911 VFG1566 Protein 4e-14 43
Q7C_1716 YP_006293550.1 transposase IS3/IS911 VFG1521 Protein 4e-13 43