Gene Information

Name : Q7C_1549 (Q7C_1549)
Accession : YP_006293385.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1555995 - 1557020 bp
Length : 1026 bp
Strand : +
Note : PFAM: TraU protein; TIGRFAM: integrating conjugative element protein, PFL_4710 family

DNA sequence :
ATGATGCGCGCTATCCGCCGTTGTGGATTCATCCTGCTGATGTGTGCGCCGCTCATGAGCCATGCTGGAACCATCTCCAC
CACGGAAATCGTCTCCCAGACCACGAGTGCCGCGCTCAGCTGTATGCGCTGGATGCCCGTGGGGATGTGCTTTTGGCTGC
GCTGTTCCATTTACGAATGCGATGTCGAGACCTCAATCAAAGTTGGCCATTACCAGCCGGATGCGGTGGTGAGCAGTTAC
AACGAACTTGGTAGCAATCCCTGGACAGAGATTCGCAGCATTCTTGGAGCCGCCCAAAGTTCCGCCGCGACAGGACTGCT
CGGTAGCTTGCTGGCCGTGCCCATCGAGAGCGCCGGGAATCGAACGGAAGGTGGGCAGGGCAACAAGGATCACCGCAATC
TGATCTTTCGGGAGACCGATGTCATTGGCCACCCTTTAGGTTCGCTGTCGGGTGTCCTCGCTGGTACCGGCTATTTGTGT
GAATCGGAAACCACCTCCTTTTATCCCTATTTCATGTCGAGCCTGGATGCACTCTCCTGGCGGATGGAAATCCCGGAGAT
GTTCTATCCAGCGAGCCTGATCCCCGGTCTGCGGGAAATCGGTAATTGGCCATCGCAAACCTGGGGTGGTGTCTACCCCA
GAACAGGCTGGACCACACAGGCAGAGGAACCCAAGGCCGCAGCAATCAATGCGCAGCGAGCCGGGGATATCGTGACCCGG
AACGGTCAGCCGCACATTTACGATCAGATCGAACCGTCTTCCAGCTCCGACCAGCGGATTTGGTCGCCGGGTCCATTGGT
TGAAGACGATCCCGCCACCGGTGAGTGGCAGATGTTGCTCCCCAAAGCAGAATCAAGCTGCGCTGTTTTTGGCACCAACG
ATCTCGCTAGCGCCAATGGTTGGGGTGGTGGCCGCGTGGACGAGGAGGGTGATTACGCCTGGAACCTGTGGAGGCCTTAT
CAGTGCTGTGAAAAAGAAGGTCAGTTTTTTCTGTTCGACATCAACTGGATCGATTACCCGCCATGA

Protein sequence :
MMRAIRRCGFILLMCAPLMSHAGTISTTEIVSQTTSAALSCMRWMPVGMCFWLRCSIYECDVETSIKVGHYQPDAVVSSY
NELGSNPWTEIRSILGAAQSSAATGLLGSLLAVPIESAGNRTEGGQGNKDHRNLIFRETDVIGHPLGSLSGVLAGTGYLC
ESETTSFYPYFMSSLDALSWRMEIPEMFYPASLIPGLREIGNWPSQTWGGVYPRTGWTTQAEEPKAAAINAQRAGDIVTR
NGQPHIYDQIEPSSSSDQRIWSPGPLVEDDPATGEWQMLLPKAESSCAVFGTNDLASANGWGGGRVDEEGDYAWNLWRPY
QCCEKEGQFFLFDINWIDYPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 6e-54 43
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-54 43
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-59 42
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 2e-57 42
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-53 42