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Name : Q7C_1546 (Q7C_1546) Accession : YP_006293382.1 Strain : Methylophaga sp. JAM7 Genome accession: NC_017856 Putative virulence/resistance : Unknown Product : type IV secretory pathway, VirB4 components Function : - COG functional category : - COG ID : - EC number : - Position : 1551833 - 1554556 bp Length : 2724 bp Strand : + Note : PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: conjugative transfer ATPase, PFL_4706 family DNA sequence : ATGCCAAAACATAAACCTAACCTTCCCGAGGGTGCGCCCTTAACCACTGCCGCGGTCAAACAACACTATACCCGCCCGCC GTCGTTTACCGATTTGCTGCCTTGGATGGAATACATTCCCGAGAGTAGAGCTTTTCTGTTAGAGGATGGGGTCAGCCTCG GCGCGCTGTTCGAGGTGCAGCCGGTCGGTTGTGAGGCAAGGACGCCAGCCTTTATGACCCAGCTGCGTGACGCCATTCAA ACGGCAATCAACGAGGCCATTCCCGAGCGCGACGATGCGCCTTGGGTATTGCAGATCTATGTGCAGGACGAGCCCAGGCT AACTCAATTCAATGAGTCGTTGGCCCGTTATCCGTCGCCGGCGGTTCGTGCTTCGGATTACTCTCAACATTACCAGTCGG TGATGTCGAAGCACCTGCAAGCGATTTCCCGACCGGGTGGGTTGTTTGACGATACCACCGTCACCGGTTCGCGTTGGCAG GGGCAGCAACGGCGGATCCGCGTTGTGCTCTACCGCCGTTTGAAAAGCAACGGCAAAATGCCACCCGCTGTTGAAGTGGA GGAGGCGCTCAATGACGTGGCCACCAAATGGATCGCCTCACTGACCTCTGCCGGAATCAACGCCCAACGGGTCAATGGTC AGGCGTTTTATCATTGGTTGCTGAGCTGGTTCAATCCCAATCCACCGCTGGCAGACGGTAATCCAGAATCAATGCTCCAG TTGGCACCCTATCCGGGCGATGACAATTTACCCTTCGGCTATGACTTTGCCGAACAGCTGACCCTGTCGATGCCCCGTTC CGACGAGACAACAGCGACTTGGCTCTTCGATAACTTGCCTCATACGGTGGTGACCATTCAAAGTCTGCGGCGGGCGCCAG ATATAGGGCACTTCACGGCGGAACGCCAGGCCGGGGATCAGGTGTATTCGCTGTTCGATCGTTTACCCGAGCACACCATC ATGGCGATAACTCTCACGCTCAAACCGCAAGACACTACCCGCAATCACATTGCCCAGATCAAGCGTGCTTCGGTAGGCGA TTCCGCTGAGGCGTCGATCACCCGGGAAGATGCGGAACACGTGGAGCGGGAAATGGCGCAGGGGAACAAGCTGTATCCCG TGAGCATGGCCTTCTATGTGCGCGGAGATAATCAAAAGGCGCTACGGAACAATTTGAATCGTCTCCACGCGCTGCTTTTG CCCAATGGTCTGCAGCCCATTGCCCAGGAAGCTGACCTGCTGTCGCTCGACAGTTACATCCGTAACCTGCCCATGGCCTA CGACGCCGACCTGGACAAATCCCGCCGACGCTCGCGGCTGATCTTCTCTCGGCATATTGCCAATATGGTACCGTTCTACG GCCGTTCCCGTGGCACCGGTCATCCCGGCCTGGTGTTCTACAACCGGGGCGCCGAACCGCTGGTCTTCGACCCGTTGCAC AGGGATGACCGTAAGAAAAACGCCCACATGCTGATCCTTGGGCCGACGGGGGCGGGCAAGTCGGCACTGTTGGTATATCT GCTGCAGCAGATGATGGCACGGCATCGGCCACGGTTTTTTATTATCGAGGCAGGGGCTTCGTTTTCGTTGCTGGGGCAGC ATTTTGCGCATCACGGTCTGTCAGTGAACCAGATCACCCTGAACCCTAATGTCGATGTTAGCCTGCCGCCTTTCGCCGAT GCGCTTCGACTTCTGGATCGGCGTCACGCGTTTAATCCACTCGATGTCGATGTATCCACAATGGAGGAGACGTTAGACGA AGATGATGAGATCGAGGAGGAAGGGGGCGGTCGCGATATCCTCGGCGAAATGGAGATCGCTGCACGTATCATGATTACCG GCGGCGATGAACGCGAAGACGCGCGATTGACCCGGGCCGACCGACTGCTGATCCGCAATGCCATATTCCTTGCCGCAAAA ACCGTGAAAGAGACCAGTCGAACCCAGGTGATTACCCAGGATGTGGTCAACGCCTTCCAGACCATCGCCACCAACAGGGA ATTGCCCGAACACCGGCGTAATCGAGCCCTGGAAATGGGGGATGGTATGGCGTTGTTCTGTTCGGGCCTGGCGGGCCACT TCTTCAACCGGCCGGGACAGTCCTGGCCTGAAGCCGATGTCACTATCCTCGAAATGGGCATGTTGGCCAGAGAGGGCTAC GAGGATCAGCTCACCGTCGCCTACCTGTCCATGATGAGCCATATCAATGACCTGGTGGAACGTCATCAACATGACGATCG GCCCACGCTGGTGGTGACTGACGAAGGCCACATCATTACCACCAATCCCTTGCTGGCGCGCTACGTGGTCAAGATCACCA AAATGTGGCGCAAGCTCGGTGCCTGGTTCTGGATCGCCACCCAGAATCTGGAAGACTTTCCGGATGCCAGCCGCAAGATG CTCAACATGATGGAGTGGTGGCTGTGCCTGGTCATGCCGAAAGAAGAGGTGGAGCAGATCGCCCGCTTCAAGGATCTCAA TGACGAACAGCGCAACCTCCTGTTGTCTGCCCGCAAGGAGCCGGGAAAATACGTGGAAGGAGTCGTCCTGGCCGACAAGG TCGAAGCGCTGTTCCGCAACGTACCGCCAGCCTTATCGCTCGCCCTGGCCATGACCGAAAAGCATGAGAAGGCTGAACGT GCAGCGATTATGCGTGAGAAGAACTGCTCGGAGCTGGAGGCGGTTTACGAGATCGCCAAGCGTATCGAGCAGTCTCGTGC GTAG Protein sequence : MPKHKPNLPEGAPLTTAAVKQHYTRPPSFTDLLPWMEYIPESRAFLLEDGVSLGALFEVQPVGCEARTPAFMTQLRDAIQ TAINEAIPERDDAPWVLQIYVQDEPRLTQFNESLARYPSPAVRASDYSQHYQSVMSKHLQAISRPGGLFDDTTVTGSRWQ GQQRRIRVVLYRRLKSNGKMPPAVEVEEALNDVATKWIASLTSAGINAQRVNGQAFYHWLLSWFNPNPPLADGNPESMLQ LAPYPGDDNLPFGYDFAEQLTLSMPRSDETTATWLFDNLPHTVVTIQSLRRAPDIGHFTAERQAGDQVYSLFDRLPEHTI MAITLTLKPQDTTRNHIAQIKRASVGDSAEASITREDAEHVEREMAQGNKLYPVSMAFYVRGDNQKALRNNLNRLHALLL PNGLQPIAQEADLLSLDSYIRNLPMAYDADLDKSRRRSRLIFSRHIANMVPFYGRSRGTGHPGLVFYNRGAEPLVFDPLH RDDRKKNAHMLILGPTGAGKSALLVYLLQQMMARHRPRFFIIEAGASFSLLGQHFAHHGLSVNQITLNPNVDVSLPPFAD ALRLLDRRHAFNPLDVDVSTMEETLDEDDEIEEEGGGRDILGEMEIAARIMITGGDEREDARLTRADRLLIRNAIFLAAK TVKETSRTQVITQDVVNAFQTIATNRELPEHRRNRALEMGDGMALFCSGLAGHFFNRPGQSWPEADVTILEMGMLAREGY EDQLTVAYLSMMSHINDLVERHQHDDRPTLVVTDEGHIITTNPLLARYVVKITKMWRKLGAWFWIATQNLEDFPDASRKM LNMMEWWLCLVMPKEEVEQIARFKDLNDEQRNLLLSARKEPGKYVEGVVLADKVEALFRNVPPALSLALAMTEKHEKAER AAIMREKNCSELEAVYEIAKRIEQSRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-160 | 47 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 47 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 0.0 | 46 |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 45 |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 45 |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 45 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 45 |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 45 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 45 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 45 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 1e-179 | 44 |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 0.0 | 44 |
