Gene Information

Name : Q7C_1492 (Q7C_1492)
Accession : YP_006293328.1
Strain : Methylophaga sp. JAM7
Genome accession: NC_017856
Putative virulence/resistance : Virulence
Product : Cro/CI family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1504959 - 1505165 bp
Length : 207 bp
Strand : -
Note : PFAM: Helix-turn-helix

DNA sequence :
ATGAATAACACACTGCGAGTGCTCAGAAATCAGCACGGCATTTCGCAGGCAGAAATAGCCAGCCAACTCAATGTTTCTCG
GCAGACCATCAATTCCATCGAAAATGGTAAGTACGATCCCAGTTTGCCGTTGGCATTCAAGATAGCGCAGTATTTTCAGC
TGAAAATCGAAGATATTTTTTTACCAGACGAACATCGTCATATCTAA

Protein sequence :
MNNTLRVLRNQHGISQAEIASQLNVSRQTINSIENGKYDPSLPLAFKIAQYFQLKIEDIFLPDEHRHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-10 57
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-10 57
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-11 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7C_1492 YP_006293328.1 Cro/CI family transcriptional regulator VFG2175 Protein 5e-11 57
Q7C_1492 YP_006293328.1 Cro/CI family transcriptional regulator VFG2168 Protein 5e-11 57