Gene Information

Name : ABTJ_p0085 (ABTJ_p0085)
Accession : YP_006291758.1
Strain :
Genome accession: NC_017848
Putative virulence/resistance : Resistance
Product : beta-lactamase class D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 62371 - 63072 bp
Length : 702 bp
Strand : +
Note : PFAM: Penicillin binding protein transpeptidase domain

DNA sequence : 
ATGAATAAATATTTTACTTGCTATGTGGTTGCTTCTCTTTTTCTTTCTGGTTGTACGGTTCAGCATAATTTAATAAATGA
AACCCCGAGTCAGATTGTTCAAGGACATAATCAGGTGATTCATCAATACTTTGATGAAAAAAACACCTCAGGTGTGCTGG
TTATTCAAACAGATAAAAAAATTAATCTATATGGTAATGCTCTAAGCCGCGCAAATACAGAATATGTGCCAGCCTCTACA
TTTAAAATGTTGAATGCCCTGATCGGATTGGAGAACCAGAAAACGGATATTAATGAAATATTTAAATGGAAGGGCGAGAA
AAGGTCATTTACCGCTTGGGAAAAAGACATGACACTAGGAGAAGCCATGAAGCTTTCTGCAGTCCCAGTCTATCAGGAAC
TTGCGCGACGTATCGGTCTTGATCTCATGCAAAAAGAAGTAAAACGTATTGGTTTCGGTAATGCTGAAATTGGACAGCAG
GTTGATAATTTCTGGTTGGTAGGACCATTAAAGGTTACGCCTATTCAAGAGGTAGAGTTTGTTTCCCAATTAGCACATAC
ACAGCTTCCATTTAGTGAAAAAGTGCAGGCTAATGTAAAAAATATGCTTCTTTTAGAAGAGAGTAATGGCTACAAAATTT
TTGGAAAGACTTTGGGCAATGGATATAAAACCACAAGTGGGCTGGTTGACCGGCTGGGTTGA

Protein sequence : 
MNKYFTCYVVASLFLSGCTVQHNLINETPSQIVQGHNQVIHQYFDEKNTSGVLVIQTDKKINLYGNALSRANTEYVPAST
FKMLNALIGLENQKTDINEIFKWKGEKRSFTAWEKDMTLGEAMKLSAVPVYQELARRIGLDLMQKEVKRIGFGNAEIGQQ
VDNFWLVGPLKVTPIQEVEFVSQLAHTQLPFSEKVQANVKNMLLLEESNGYKIFGKTLGNGYKTTSGLVDRLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oxa-23 AFV47968.1 class D beta-lactamase OXA-23 Not tested AbaR25 Protein 3e-100 100
oxa-23 AFV47996.1 class D beta-lactamase OXA-23 Not tested delta-AbaR25 Protein 3e-100 100
BJAB0715_00989 YP_008216137.1 Beta-lactamase class D Not tested AbaR27 Protein 4e-100 100
oxa23 AEO37447.1 class D beta-lactamase OXA-23 Not tested AbaR4 Protein 4e-100 100
oxa23 AEZ06035.1 OXA-23 class D beta-lactamase Not tested Tn6167 Protein 4e-100 100
bla(Oxa-23) AFH57213.1 carbapenemase Not tested AbaR4b Protein 3e-100 100
oxa-Ab ACV89830.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR6 Protein 1e-61 57
oxa-Ab ACV89832.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR7 Protein 1e-61 57
oxa-Ab ADK35783.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR8 Protein 1e-61 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM488988.1.gene1.p1 Protein 2e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM488989.1.gene1.p1 Protein 2e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY795964.gene.p01 Protein 2e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM488992.1.gene1.p1 Protein 2e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D JN638887.1.gene1.p01 Protein 2e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY762325.1.gene1.p01 Protein 2e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM488986.1.gene1.p1 Protein 2e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D NC_011586.7044972.p0 Protein 2e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D FJ194494.1.gene1.p01 Protein 1e-100 100
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM488987.1.gene1.p1 Protein 5e-100 99
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM488990.1.gene1.p1 Protein 3e-100 99
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AF201828.gene.p01 Protein 3e-100 99
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM488991.1.gene1.p1 Protein 6e-100 99
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY288523.1.gene1.p01 Protein 5e-100 99
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ122933.1.gene1.p01 Protein 1e-62 63
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AF509241.1.gene1.p01 Protein 3e-64 60
ABTJ_p0085 YP_006291758.1 beta-lactamase class D NC_012813.7996741.p0 Protein 3e-64 60
ABTJ_p0085 YP_006291758.1 beta-lactamase class D NC_013506.8571544.p0 Protein 3e-64 60
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF534256.2.gene1.p01 Protein 3e-64 60
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AJ239129.2.gene1.p01 Protein 3e-64 60
ABTJ_p0085 YP_006291758.1 beta-lactamase class D NC_013277.8458023.p0 Protein 3e-64 60
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AF201827.1.gene1.p01 Protein 3e-64 60
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AM991978.1.gene1.p01 Protein 1e-63 59
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AF201826.1.gene1.p01 Protein 1e-63 59
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY750907.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU019534.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ734813.1.gene1.p01 Protein 4e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D JN248564.1.gene1.p01 Protein 1e-60 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AM231719.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ392963.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ519088.1.gene1.p01 Protein 1e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM113559.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ519089.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU547447.1.gene1.p1 Protein 3e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF650037.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF653400.1.gene1.p01 Protein 3e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM113558.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ491200.1.gene1.p01 Protein 4e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D GQ853679.1.gene1.p1 Protein 7e-62 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY750908.1.gene1.p01 Protein 1e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU547446.1.gene1.p1 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ385606.gene.p01 Protein 3e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY750913.1.gene1.p01 Protein 1e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY750909.1.gene1.p01 Protein 2e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ309277.1.gene1.p01 Protein 4e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AJ309734.2.gene1.p01 Protein 3e-61 58
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU220745.1.gene1.p01 Protein 2e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU220744.1.gene1.p01 Protein 2e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY750911.1.gene1.p01 Protein 8e-62 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AM279652.1.gene1.p01 Protein 2e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ519087.1.gene1.p01 Protein 4e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ309276.1.gene1.p01 Protein 2e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ519086.1.gene2.p01 Protein 3e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU019536.1.gene1.p01 Protein 6e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM113563.1.gene1.p01 Protein 8e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU029998.1.gene2.p01 Protein 9e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ335566.1.gene1.p01 Protein 7e-62 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM570035.1.gene1.p01 Protein 5e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D JN215211.1.gene1.p01 Protein 7e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU019535.1.gene1.p01 Protein 3e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF650033.1.gene1.p01 Protein 2e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY750912.1.gene1.p01 Protein 3e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF650035.1.gene1.p01 Protein 1e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ425492.1.gene1.p01 Protein 7e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ734812.1.gene1.p01 Protein 3e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ998857.1.gene1.p01 Protein 9e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF650038.1.gene1.p01 Protein 9e-62 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM113560.1.gene1.p01 Protein 6e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D NC_011595.7059224.p0 Protein 8e-62 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF650036.1.gene1.p01 Protein 2e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU547445.1.gene1.p1 Protein 2e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF650034.1.gene1.p01 Protein 6e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AB634250.1.gene1.p01 Protein 8e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM113564.1.gene1.p01 Protein 7e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF650032.1.gene1.p01 Protein 2e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM113561.1.gene1.p01 Protein 3e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM113562.1.gene1.p01 Protein 1e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HM570036.1.gene1.p01 Protein 2e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF581285.1.gene1.p01 Protein 5e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ425494.1.gene1.p01 Protein 3e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ888718.1.gene1.p01 Protein 1e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ425495.1.gene1.p01 Protein 6e-61 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ734811.1.gene1.p01 Protein 2e-60 57
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY750910.1.gene1.p01 Protein 9e-61 56
ABTJ_p0085 YP_006291758.1 beta-lactamase class D JN603240.1.gene1.p1 Protein 5e-61 56
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY862132.1.gene1.p01 Protein 4e-61 56
ABTJ_p0085 YP_006291758.1 beta-lactamase class D FJ872530.1.gene1.p01 Protein 2e-60 56
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EU375515.1.gene1.p1 Protein 8e-61 56
ABTJ_p0085 YP_006291758.1 beta-lactamase class D HQ425493.1.gene1.p01 Protein 1e-59 56
ABTJ_p0085 YP_006291758.1 beta-lactamase class D GQ853680.1.gene1.p1 Protein 2e-60 56
ABTJ_p0085 YP_006291758.1 beta-lactamase class D GQ853681.1.gene1.p1 Protein 7e-61 56
ABTJ_p0085 YP_006291758.1 beta-lactamase class D NC_010481.6155789.p0 Protein 5e-50 52
ABTJ_p0085 YP_006291758.1 beta-lactamase class D DQ519090.1.gene1.p01 Protein 8e-50 52
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY665723.gene.p01 Protein 5e-50 52
ABTJ_p0085 YP_006291758.1 beta-lactamase class D EF102240.1.gene13.p0 Protein 7e-50 52
ABTJ_p0085 YP_006291758.1 beta-lactamase class D GU831575.1.gene1.p01 Protein 3e-49 50
ABTJ_p0085 YP_006291758.1 beta-lactamase class D AY306130.1.gene1.p01 Protein 4e-37 44