Gene Information

Name : ABTJ_00186 (ABTJ_00186)
Accession : YP_006288151.1
Strain : Acinetobacter baumannii MDR-TJ
Genome accession: NC_017847
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 202462 - 204177 bp
Length : 1716 bp
Strand : +
Note : PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family

DNA sequence :
ATGAAATGGAATTCATTCAAAGCGAAAGCCTTATTGGCAGCAGCATCGCTATATTCAACTGTTGCTATGGCAAGCCCGGA
CTTAGGTGAAGCAGAACAGCAAGCCACCAACTGGCATGCCATTATCATGTTTATCATCTTTGTTGGCTTTACCTTGTTTA
TTACCAAATGGGCGGCTAAACAAACTCAATCAGCGCAAGACTTCTATACTGCTGGTGGTGGGATCAGTGGTTTCCAAAAC
GGTTTGGCGATTGCGGGTGACTATATGTCAGCAGCGTCATTCCTTGGTATTTCTGCAATGGTGTTTAGCTCAGGTTTTGA
CGGCTTGCTCTATTCACTCGGGTTCATGGTTGGTTGGCCAATCGTTTTATTCTTGGTGGCAGAACGCTTACGTAACCTTG
GTAAATATAACCTTTCAGACGTAGTGTCATTCCGTCTTGAAGAAAAACCAGTTCGTACTTTAGCTGCTTTCAGCTCGCTT
GTTGTAGTCGCGTTCTATTTGATTGCACAAATGGTAGGGGCAGGTCAGCTCATCAAACTATTATTTGGTTTGAACTATAA
CATTGCAGTTGTGATTGTCGGCTTGCTCATGATGGCATACGTTATTTTCGGCGGAATGCTAGCAACCACATGGGTACAAA
TCATTAAAGCAGTGATGTTATTAAGTGGTGCAACTTTCATGGCCTTTATGGTGATGAAAGCGGTTGGTTTCAGTTTTAGT
AATATGTTCACCCAATCAATTGAAGTGTTCAGTAAAGTTCATGATGTAAGCTTTGAAGATGCTGCAAAAATTATGGGACC
AGGTAAACTTGCCGCAAACCCGATTGATGCCTTATCTCTTGGCTTAGCACTCATGTTTGGTACAGCAGGTCTTCCACACA
TTCTTATGCGTTTCTTCACGGTAAAAGACGCAAAAGAAGCGCGTAAATCGGTTGTCGTTGCAACAGGTTTTATTGGTTAC
TTCTATCTTTTAACTTTCATTATTGGTTTCGGTGCGATCCTTTTCGTATCAAACAACCCGCAATTCCTTGATGTTGCGAA
AATGGCAATGACCGGCAAACTTGAGCTTGTTGGTGGTAACAATATGGCAGCCGTGCATTTAAGTGACGCTTTAGGCGGTG
ACTTATTCATGGGCTTCATTTCAGCAGTAGCGTTCGCAACGATTCTTGCAGTTGTTGCTGGTTTAACACTTTCAGGTGCA
TCTGCGATCTCACACGATTTATACGCTAACGTATTTAAAAAAGGTCAAACCACGCCAGCTTCAGAGCTTCGCATGTCAAA
AATCGCGACGCTTGGTTTAGCAATCTTTGCCATGATTTTAGGTATTTTGTTTGAAAAGCAAAACGTAGCATTCATGGTAG
GTTTAGCATTCTCTGTAGCGTGTTGTGCAAACTTCCCAATTCTTGTTCTTTCAATGTTCTGGAAAGGTTTAACAACTCGT
GGTGCGGTCATTGGTGGTGTAGTTGGTCTTGTAACAGCGGTTGTACTCATTATTCTGTCTAAAGCAGTATGGGTAGATAC
TTTAAAAATCTCTGACACCCCAATTAACCCGTTCAATGGTCCTGCATTATTTGCAATGCCTTTGTCGTTCCTTTGCTGCT
GGTTCTTCTCGGTAACTGACAGCTCAGCACGTGCGAAAAAAGAACGCGCTTCTTTCGACGCTCAATATGTTCGTTCAATG
ACAGGTATTGGTGCTTCTGGCGCATCAGACCACTAA

Protein sequence :
MKWNSFKAKALLAAASLYSTVAMASPDLGEAEQQATNWHAIIMFIIFVGFTLFITKWAAKQTQSAQDFYTAGGGISGFQN
GLAIAGDYMSAASFLGISAMVFSSGFDGLLYSLGFMVGWPIVLFLVAERLRNLGKYNLSDVVSFRLEEKPVRTLAAFSSL
VVVAFYLIAQMVGAGQLIKLLFGLNYNIAVVIVGLLMMAYVIFGGMLATTWVQIIKAVMLLSGATFMAFMVMKAVGFSFS
NMFTQSIEVFSKVHDVSFEDAAKIMGPGKLAANPIDALSLGLALMFGTAGLPHILMRFFTVKDAKEARKSVVVATGFIGY
FYLLTFIIGFGAILFVSNNPQFLDVAKMAMTGKLELVGGNNMAAVHLSDALGGDLFMGFISAVAFATILAVVAGLTLSGA
SAISHDLYANVFKKGQTTPASELRMSKIATLGLAIFAMILGILFEKQNVAFMVGLAFSVACCANFPILVLSMFWKGLTTR
GAVIGGVVGLVTAVVLIILSKAVWVDTLKISDTPINPFNGPALFAMPLSFLCCWFFSVTDSSARAKKERASFDAQYVRSM
TGIGASGASDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 7e-139 57
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-80 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABTJ_00186 YP_006288151.1 SSS sodium solute transporter BAC0564 Protein 2e-162 67
ABTJ_00186 YP_006288151.1 SSS sodium solute transporter BAC0570 Protein 7e-147 60