Gene Information

Name : ABTJ_01768 (ABTJ_01768)
Accession : YP_006289668.1
Strain : Acinetobacter baumannii MDR-TJ
Genome accession: NC_017847
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1819647 - 1821299 bp
Length : 1653 bp
Strand : +
Note : PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family

DNA sequence :
ATGAATAAATATTTTGCTTTTACTATTTTGACCTTATTTAGCTCCGGTGCTTGGGCTTCACAAAGCGAGCCAAGGAATTG
GACCGCAATTATTATGTTTGCATGTGTAGTTGGTATTTCACTACTTATTACTTTTAAAGCTGCAAAGAAAACAGTATCGA
AAGAAGATTTTTATACAGCGGGTAATGCTATTTCAGCTAAGCAAAATGGTTTGGCGATTGCGGGAGACTATATGTCTGCC
TCAACCTTACTCGGTATTTCTAGTATGGTTTTCTTCAAAGGCTATGATGGTTTTATCTATGTGACAGGCTTTTTTGTTTG
TTGGCCCATTTTAACTTTCTTAATGGCTGAAAGACTAAGAAACCTTGGCAAATATACTTTTGCAGATATTGTTTCGTATC
GATTAGATCCACAGCGCACCCGTATTTTGGCAACGTGTGGTTCACTTATTGTTGTGTGTTGCTATTTAATTTTGCAAATG
GTGGGTGCAGGTCAGCTGATTAAATTATTGTTTGGTCTAGATTATAAAATTGCCGTTATGCTGGTCGGTTGTCTAATGCT
GGTGTATGTCATTTTCGGAGGAATGCTTGCAACCACATGGATACAAATAGTTAAAGCTATTCTTTTGCTCTTTGGCGGAA
CCGTTTTAGTCTTTCTGGCATATAAAGCGTTTGGTTTTAGTTTAAATAATATGGCTGAGGCTGCCGTTAATACACATAAA
TTAGGACAAAAGGTGTTAGAACCGGGTCCAATGTTATCCAACCCGATTAATACACTCTCTATGTCTATTGGGTTGATCTT
TGGTTTAGCAGGTTTACCACATATTCTGATGCGCTTTTTTACGGTTCCAAATGCTGCTGAAGCACGCCGTTCAGTCTTTT
ATGCTTCTGGTTATATTGGTTACTTCTTTATTGTAGTTTGTATTTTAGGTTTAGCTTCCATCGCCATAGTAGGCACGAAT
CCTCAATATTTTGTAGATGGGCACCTCGGTGGAGATTTAATTGGCGGCAGTAACATGGTTGCGATGCATCTAGCAAAAGC
CCTTGGTGGAAATCTATTACTCGGCTTTTTATCTGCTGTAGCATTTGCAACGATTTTAGCTGTGGTGGCTGGCTTGGTAC
TTGCTGGAGCTTCTGCGATTTCCCATGATTTATTTCAAAAAGTCATTAAGAAAGGCAAGGCAACTGAAAAGCAGGAAATG
GTTGTATCTCGACTTTCTGTGGTGGTTCTAGGTGTGATTGCCATAGCATGTGGAATCTTATTTGAAAAAATGAACATCGC
TTTTTTAATGGGACTTACATTTGGTATTGCTGCTTCCGCTAACTTTCCTGTACTTATTCTTTCTATGTACTGGAAAGATT
TAACTACCCGCGGCGCCATATTTGGTGGGTTTGTAGGAATCATTTCCGCAATTACCTTTGTAGTTTTATCACCTACGGTC
TGGGTAGGTGTTTTAGGGCATGAAAAAGCAATATTCCCATTTGATAATCCAGCATTATTTTCAATGCCCCTCGCTTTTTT
AGTGAGTATTGTTGTGTCTTTGACTGATAAAAGTGAAAGAGCCAAGTTAGATAAACAGGGTTTTGAATTACAAGTGGTGC
GTTCAGAGCTTGGGGCTCAACAAGGGTCGTTTGAAAAAATGCCTTTGCATTAA

Protein sequence :
MNKYFAFTILTLFSSGAWASQSEPRNWTAIIMFACVVGISLLITFKAAKKTVSKEDFYTAGNAISAKQNGLAIAGDYMSA
STLLGISSMVFFKGYDGFIYVTGFFVCWPILTFLMAERLRNLGKYTFADIVSYRLDPQRTRILATCGSLIVVCCYLILQM
VGAGQLIKLLFGLDYKIAVMLVGCLMLVYVIFGGMLATTWIQIVKAILLLFGGTVLVFLAYKAFGFSLNNMAEAAVNTHK
LGQKVLEPGPMLSNPINTLSMSIGLIFGLAGLPHILMRFFTVPNAAEARRSVFYASGYIGYFFIVVCILGLASIAIVGTN
PQYFVDGHLGGDLIGGSNMVAMHLAKALGGNLLLGFLSAVAFATILAVVAGLVLAGASAISHDLFQKVIKKGKATEKQEM
VVSRLSVVVLGVIAIACGILFEKMNIAFLMGLTFGIAASANFPVLILSMYWKDLTTRGAIFGGFVGIISAITFVVLSPTV
WVGVLGHEKAIFPFDNPALFSMPLAFLVSIVVSLTDKSERAKLDKQGFELQVVRSELGAQQGSFEKMPLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 7e-127 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABTJ_01768 YP_006289668.1 SSS sodium solute transporter BAC0564 Protein 5e-123 59
ABTJ_01768 YP_006289668.1 SSS sodium solute transporter BAC0570 Protein 6e-114 57