Gene Information

Name : ABTJ_01324 (ABTJ_01324)
Accession : YP_006289230.1
Strain : Acinetobacter baumannii MDR-TJ
Genome accession: NC_017847
Putative virulence/resistance : Unknown
Product : integron integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1376883 - 1377842 bp
Length : 960 bp
Strand : -
Note : PFAM: Phage integrase family; TIGRFAM: integron integrase

DNA sequence : 
ATGAAAACCGCCACTGCGCCGTTACCACCGCTGCGTTCGGTCAAGGTTCTGGACCAGTTGCGTGAGCGCATACGCTACTT
GCATTACAGCTTACCAACCGAACAGGCTTATGTCAACTGGGTTCGTGCCTTCATCCGTTTCCACGGTGTGCGTCACCCGG
CAACCTTGGGCAGCAGCGAAGTCGAGGCATTTCTGTCCTGGCTGGCGAACGAGCGCAAGGTTTCGGTCTCCACGCATCGT
CAGGCATTGGCGGCCTTGCTGTTCTTCTACGGCAAGGTGCTGTGCACGGATCTGCCCTGGCTTCAGGAGATCGGAAGACC
TCGGCCGTCGCGGCGCTTGCCGGTGGTGCTGACCCCGGATGAAGTGGTTCGCATCCTCGGTTTTCTGGAAGGCGAGCATC
GTTTGTTCGCCCAGCTTCTGTATGGAACGGGCATGCGGATCAGTGAGGGTTTGCAACTGCGGGTCAAGGATCTGGATTTC
GATCACGGCACGATCATCGTGCGGGAGGGCAAGGGCTCCAAGGATCGGGCCTTGATGTTACCCGAGAGCTTGGCACCCAG
CCTGCGCGAGCAGCTGTCGCGTGCACGGGCATGGTGGCTGAAGGACCAGGCCGAGGGCCGCAGCGGCGTTGCGCTTCCCG
ACGCCCTTGAGCGGAAGTATCCGCGCGCCGGGCATTCCTGGCCGTGGTTCTGGGTTTTTGCGCAGCACACGCATTCGACC
GATCCACGGAGCGGTGTCGTGCGTCGCCATCACATGTATGACCAGACCTTTCAGCGCGCCTTCAAACGTGCCGTAGAAGG
CACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAACTCTGCTTACCAGGCG
CATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGA

Protein sequence : 
MKTATAPLPPLRSVKVLDQLRERIRYLHYSLPTEQAYVNWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHR
QALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
DHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHST
DPRSGVVRRHHMYDQTFQRAFKRAVEGTVAKLAMRQPFVLFKGLTFQKLCLPGAFRPGDHHNKMLRPGLCVVHASPQYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI1 ADZ05801.1 integrase Not tested AbaR19 Protein 2e-94 99
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 4e-117 95
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 1e-116 95
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 2e-116 95
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 4e-117 95
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 1e-116 95
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 4e-117 95
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 1e-116 95
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 4e-117 95
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 1e-116 95
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 2e-116 95
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 4e-117 95
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 1e-116 95
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 2e-116 95
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 2e-116 95
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 4e-117 95
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 1e-116 95
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 1e-116 95
intI YP_001844881.1 integrase Not tested AbaR20 Protein 2e-116 95
intI1 AAK02045.1 integrase Not tested SGI1 Protein 4e-117 95
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 1e-116 95
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 2e-116 95
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 4e-117 95
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 1e-116 95
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 2e-116 95
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 3e-115 94
int1 YP_005160012.1 integrase Not tested Not named Protein 1e-88 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABTJ_01324 YP_006289230.1 integron integrase VFG1028 Protein 2e-115 94