Gene Information

Name : D7S_00043 (D7S_00043)
Accession : YP_006285758.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 40376 - 41311 bp
Length : 936 bp
Strand : -
Note : -

DNA sequence : 
ATGGACTATTTACACATCGCTCAGGAAACCCTGGGTGTGGAAGAAAACGCCCTCGGGCAACTTAAACAAAGATTAGACGG
CACTTTCGCCGACGTCGTAAATTTGATTCTGAACTGCAAAGGTCGTTTGGTTATCGGCGGCATCGGCAAGTCCGGATTGG
TAGGCAAAAAAATGGTTGCCACTTTCGCTTCCACCGGCACGCCAAGTTTCTTCTTACACCCGACGGAAGCTTTCCACGGT
GATTTAGGGATGCTTAAACCCATTGATGTGGTTATGCTCATATCTTATAGCGGCGAAACCGACGATGTGAACAAACTCAT
TCCAAGCCTGAAAAACTTCGGTAATAAAATCATCGCTTTAACCTCGAATAAAAATTCTACGCTGGCGCGCCATGCGGATT
ATGTGTTGGACATCACCGTAGAACGCGAAGTCTGCCCGAATAATCTGGCACCGACCACCTCCGTTATTGTCACCATGGCA
TTGGGCGACGCATTAGCCGTCTGTTTAATGCGCGCCCGCGATTTCCAACCAGAAGATTTCGCCAAATTCCACCCTGGCGG
CAGTTTGGGACGCCGTTTGTTATGCCGCGTGAAAGATCAAATGCAAACCCACTTGCCGATCGCCGCATTAACCACTACCT
TCACCGATTGTTTAAGCATCATGAACGAAGGCAGAATGGGCGTGGCGTTGGTGATGGAACAACAGCAACTGCGCGGCATT
ATTACCGATGGCGATATTCGACGCGCGCTCACCGCAAACGGTGCAGAAACCTTGAATAAAACTGCGCAGGAGCTCATGAC
GTCTCATCCGAAGACCATTCACCAAGACACCTATATTTCGGAAGCGGAAAATTACATGAAAGCGCATAAAATTCATTCTT
TGGTTGTAGTGGATGATGCGCAACACGTGGTCGGTTTAGTGGAGTTTTCAAGTTAA

Protein sequence : 
MDYLHIAQETLGVEENALGQLKQRLDGTFADVVNLILNCKGRLVIGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHG
DLGMLKPIDVVMLISYSGETDDVNKLIPSLKNFGNKIIALTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSVIVTMA
LGDALAVCLMRARDFQPEDFAKFHPGGSLGRRLLCRVKDQMQTHLPIAALTTTFTDCLSIMNEGRMGVALVMEQQQLRGI
ITDGDIRRALTANGAETLNKTAQELMTSHPKTIHQDTYISEAENYMKAHKIHSLVVVDDAQHVVGLVEFSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-72 53
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-73 53
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 1e-72 53