Gene Information

Name : D7S_00398 (D7S_00398)
Accession : YP_006286079.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : thioredoxin peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 401644 - 402144 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAAAGTCACTTTAACAGGCACCCCTATTGATGTTGCCGGCACTTTTCCTGCAACAGATACGCAAATCGCCGATTT
CACTTTAGTCAACAATGAATTGGCAGATGTGGCACTTAATAGCTTTGCCGGTAAACGCAAAGTCTTAAATATTTTCCCAA
GTATCGACACTGGTGTTTGCGCCACATCGGTACGCAAATTCAATGAAAAAGCGGCAAATTTGGCAAATACCGTAGTGCTT
TGCATTTCCGCCGATTTACCGTTCGCCCAAGCCCGTTTCTGTGGCGCGGAAGGCGTTGAAAATGTCAAAACCCTTTCCAC
CTTCCGTAACCACGCCCTACACAACACCTTAGGCGTTGACATCACCTCCGGTCCGCTTGCCGGCTTAACGGCACGCGCGG
TTATTGTGTTGGATGAAAATAACAACGTGTTACACAGCGAGTTAGTTTCTGAAATTAAGAATGAACCCAATTACGACGCG
GCACTTGCGGTATTAGCATAG

Protein sequence : 
MSKVTLTGTPIDVAGTFPATDTQIADFTLVNNELADVALNSFAGKRKVLNIFPSIDTGVCATSVRKFNEKAANLANTVVL
CISADLPFAQARFCGAEGVENVKTLSTFRNHALHNTLGVDITSGPLAGLTARAVIVLDENNNVLHSELVSEIKNEPNYDA
ALAVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-34 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-34 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-34 47
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-34 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_00398 YP_006286079.1 thioredoxin peroxidase VFG0087 Protein 7e-35 47