Gene Information

Name : D7S_00263 (D7S_00263)
Accession : YP_006285962.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 273072 - 274580 bp
Length : 1509 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGAACAAGAAGTCAAAGAATTAGACCTGAACGGCGAAATGTTGGTACGCCGTGAAAAATTAGCCGCCTTGCGCGC
CAAAGGCAATGCCTTCCCAAACCAATTCCGTCGCGATGCGCTTGCACAGGATTTGCACGATAAATATGATGCCGAAGAGG
GCGAAGCATTAAAAGAAAAACACATTGAAGTTACCGTTGCCGGACGTATCATGACTCGTCGCGCCATGGGTAAAGCCACC
TTTATCACCATTCAAGATATGAGCGGCAAAATTCAGCTTTATGTGGCGCGCGATAACCTGCCTGAAGGCGTGTATAAAGA
TGATGTAGGTCACTGGGATTTGGGTGACATTGTCGGTATTAAAGGTTCGCTATTCAAAACCAAAACCGACGAACTCACCG
TGAAAGCCACCGAAGTTCAGTTATTAACCAAAGCTCTTCGCCCGCTGCCGGACAAATTCCACGGTTTAACCGACCAAGAA
GTGCGTTATCGCCAACGTTATTTGGATTTAATTTCTAACGAAGAATCCCGCCGCACTTTCATCATTCGTTCTAAAGTCGT
CGCCGGCATTCGTGAATATTTCCTTTCCAAAGGCTTCATGGAAGTGGAAACCCCAATGTTGCAAGTGATTCCGGGTGGTG
CAGCGGCTCGTCCGTTTGTCACACATCACAATGCCTTAGACGTGGATATGTATTTGCGTATCGCACCGGAACTTTACTTA
AAACGTTTAGTGGTGGGCGGCTTTGAACGCGTATTCGAATTGAACCGCAATTTCCGTAACGAAGGCGTTTCCGTACGTCA
CAATCCGGAATTCACCATGCTGGAATACTACCAAGCCTACGCCGATTACCACGATTTAATGGACAACACCGAAGAATTAT
TACGTAAATTGGCGATTGATATTTTGGGCACCACCATCGTGAAATACGGCGACTTAGAATTTGATTTCGGCAAACCGTTC
GAGCGTATCACCTTACACAACGCCATCATCAAATACGGCTCCGAAAAAGGCATTGTGAAAGAAGATTTATACGATTTCGA
CCGCGCCAAAGCCACCGCAGAACGTTTAGGCATCGAAGTACAAAAATCCTGGGGCTTAGGCAGCATTGTGAACGCCATCT
TTGAAGAAGTGGCAGAACATCACTTAATTCAGCCGACTTTTTTAATGGCTCACCCTGCTGAAATTTCACCGCTCGCCCGT
CGTAACGATGAAAATCCGGAAGTCACAGACCGTTTTGAACTCTTCATCGGCGGACGTGAAATCGGTAACGGCTTCTCAGA
ATTAAACGACGCCGAAGACCAAAACGACCGTTTCGACGCACAAGTCGCCGCCAAAGAAGCCGGTGATGACGAAGCGATGT
TTAAAGATGAAGACTTCGTGATCGCACTCGAACACGGCTTACCACCAACAGCCGGCGAGGGCTTAGGCATCGACCGCTTG
GCAATGCTCTACGCCAACGCGCCATCTATCCGTGATGTGATTTTATTCCCGGCAATGCGGCAGAAGTAG

Protein sequence :
MSEQEVKELDLNGEMLVRREKLAALRAKGNAFPNQFRRDALAQDLHDKYDAEEGEALKEKHIEVTVAGRIMTRRAMGKAT
FITIQDMSGKIQLYVARDNLPEGVYKDDVGHWDLGDIVGIKGSLFKTKTDELTVKATEVQLLTKALRPLPDKFHGLTDQE
VRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYL
KRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPF
ERITLHNAIIKYGSEKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVAEHHLIQPTFLMAHPAEISPLAR
RNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNDRFDAQVAAKEAGDDEAMFKDEDFVIALEHGLPPTAGEGLGIDRL
AMLYANAPSIRDVILFPAMRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 6e-153 63
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 5e-89 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_00263 YP_006285962.1 lysyl-tRNA synthetase VFG1668 Protein 4e-153 63