Gene Information

Name : D7S_02113 (D7S_02113)
Accession : YP_006287658.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : iron ABC superfamily ATP binding cassette transporter, binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1985571 - 1986452 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTTTATTAGCCACATTAGTCAGCATACTTGCGTTAAGCTTAAGCAGTAGTCTTGCTTATGCGAAATTTAAAGTTGT
CACTACGTTCACTATTATTCAAGATATGGCACAAAATGTCGCCGGTGATGCGGCAACCGTAGAATCCATCACCAAGCCCG
GAGCAGAAATCCATGATTACGAGCCAACCCCGAAAGATATTGTCAAGGCACAATCTGCCGATTTAGTGTTATGGAACGGT
TTGAACCTTGAGCGTTGGTTTGAAAAATTCTTCCAAAACGTCAAAGATAAACCGGCGGTCGTTGTAACCGAAGGCATTGA
ACCGATGTCAATTCATGAAGGCCCGTACACCGGCAACCCGAACCCGCATGCCTGGATGTCGCCTTCCAATGCTTTAATCT
ATGTTGAAAATATTAAAAATGCGTTGATTAAATACGATCCACAAAATAAAGAAACATACGAAAAAAATACCGCACTTTAT
ATCCAAAAAATCAAAGAACTTGATCAACCGTTGCGTGAAAAATTAGCACAAGTGCCAGAAGCACAGCGTTGGTTGGTGAC
CAGCGAAGGCGCATTCAGTTATTTAGCACGTGATTACGGTTTTAAAGAGGCTTATTTGTGGCCGATTAACGCTGAGCAAC
AAGGCACGCCGCAACAAGTGCGTAAAGTAATTGAAACCGTCAAAGCCAACAATATTCCGGTCGTATTCAGTGAAAGCACC
ATCTCCCCGAAACCGGCAAAACAAGTAGCAAAAGAAACCGGTGCAAAATACGGTGGCGTGCTTTATGTTGACTCTCTTTC
CGGTGCCAAGGGTCCTGTGCCGACTTATATTGATTTGTTAAAAGTGACTGTTTCTACCATTGCTAAAGGATTTGAAAAAT
AA

Protein sequence : 
MRLLATLVSILALSLSSSLAYAKFKVVTTFTIIQDMAQNVAGDAATVESITKPGAEIHDYEPTPKDIVKAQSADLVLWNG
LNLERWFEKFFQNVKDKPAVVVTEGIEPMSIHEGPYTGNPNPHAWMSPSNALIYVENIKNALIKYDPQNKETYEKNTALY
IQKIKELDQPLREKLAQVPEAQRWLVTSEGAFSYLARDYGFKEAYLWPINAEQQGTPQQVRKVIETVKANNIPVVFSEST
ISPKPAKQVAKETGAKYGGVLYVDSLSGAKGPVPTYIDLLKVTVSTIAKGFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-93 67
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-93 67
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-93 67
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-93 67
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-93 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_02113 YP_006287658.1 iron ABC superfamily ATP binding cassette transporter, binding protein BAC0439 Protein 2e-104 76
D7S_02113 YP_006287658.1 iron ABC superfamily ATP binding cassette transporter, binding protein BAC0349 Protein 8e-94 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_02113 YP_006287658.1 iron ABC superfamily ATP binding cassette transporter, binding protein VFG0525 Protein 8e-94 67