Gene Information

Name : D7S_02112 (D7S_02112)
Accession : YP_006287657.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : putative ABC-type chelated iron transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1984681 - 1985571 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence : 
ATGTCATCAAATATTGCCTCTATTTGCGTTGAAGACGTAGTCGTTCGTTACAACAATGGTCATACCGCCATTCATGATGT
TTCTTTTAAACTAGAAGGCGGTATGACCTGCGCTTTAGTCGGCGTGAACGGGAGCGGTAAGTCAACCCTGTTTAAAAGTC
TGATGGGGTTAATTACACCGCAACGAGGTAATATTTCTCTTTGCAATCTCACAATTAAACAAGCCTTAAAACAAAATTTA
GTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTA
TGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTG
AACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGCATTTCTTGCCCGCGCGCTCGCACAA
CAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTGCAAACGGAAAACGCCATTATTGATTTATTAGG
TCAGTTACGCAGTGAAAGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGG
TAATGATTAACCGCACGGTAATCGCTGCAGGTTTGACCGAAACTACTTTTAACCAGCATAACTTGGAATTGGTTTTTGGC
GGTGTATTGCGCCATATTAAGCTATTAGGCGAAGACTTGCATGATGACGAGGACCCACGCGCCGTTACGGTATTAACCGA
TGATGAGCGGGCAGCGGTATTCTATGGTAAAACTAAAATTGATCCACCTGCACCTACTGTCAGATATACCAAACCGAAGG
AAGACGCATAA

Protein sequence : 
MSSNIASICVEDVVVRYNNGHTAIHDVSFKLEGGMTCALVGVNGSGKSTLFKSLMGLITPQRGNISLCNLTIKQALKQNL
VSYVPQSEDVDWQFPVSVYDVVLMGRYGYMNFLRRPSETDKQKVQEAMQRVNIEHLAHRQIGELSGGQKKRAFLARALAQ
QSKIILLDEPFTGVDVQTENAIIDLLGQLRSERHLILVSTHNLGSVPDFCDRVVMINRTVIAAGLTETTFNQHNLELVFG
GVLRHIKLLGEDLHDDEDPRAVTVLTDDERAAVFYGKTKIDPPAPTVRYTKPKEDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-73 60
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-73 60
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-71 59
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-71 59
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-72 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_02112 YP_006287657.1 putative ABC-type chelated iron transport system, ATPase component BAC0440 Protein 1e-94 69
D7S_02112 YP_006287657.1 putative ABC-type chelated iron transport system, ATPase component BAC0350 Protein 5e-72 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_02112 YP_006287657.1 putative ABC-type chelated iron transport system, ATPase component VFG0526 Protein 4e-72 59