Gene Information

Name : D7S_02111 (D7S_02111)
Accession : YP_006287656.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : putative ABC-type chelated iron transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1983824 - 1984681 bp
Length : 858 bp
Strand : -
Note : -

DNA sequence : 
ATGTGGGACCTGTTATTAGAACCCTTTTCCTACGATTACATGGTGAAAGCCATTTTAATCAGCTCGGCGGTGGGTGGCAT
TTGTGCGTTTTTATCCGCTTATTTAATGCTGAAAGGTTGGTCACTGATTGGTGATGCCCTTTCTCATTCCGTCGTACCCG
GCGTTGCCATTGCTTATGCCCTCTCCCTGCCCTACGCGCTTGGTGCATTTTTTTCCGGTATCCTCGCCGCCATCGCCATT
CTTTGGATAAAATCCATTACCAAACTCCGTGAAGACGCAGTCATCGGCTTTATTTTTACCACTTTCTTTGCCCTTGGCCT
ACTGATTATTTCCCTTAACCCGACGTCGATTAACGTACAAGACATTATCTTAGGCAACATTCTGGGCATTGCCGATGAAG
ATATTCTGCAAGTCGGCATTATCATCGGCGTTTGTTTAGTATTACTGCTGATCTTTTGGAAAGATCTTTTGCTGATTTTC
TTTGATGAAGTGCACGCTACTTCCGTCGGCTTTTCACCGATTTACTACAAAATCCTGTTTTTCACCTTGCTCAGCGCCTG
CGTGGTCGCCGCGTTACAAACTGTCGGTGCCATTTTGGTTATCGCCATGGTTATCACACCGGGCGCAACCGCTTACCTGC
TCACCGATCGTTTTAAAACCTTGGTCCTTATTGCCGTAGTTTTAGGCATTTCCTCCAGTTCCGTAGGCGTTTATATAAGC
TATTTCTTAGACGGCGCAACAGGTGGCGTTATTGTTTGTATTCAGACCGCTCTTTTCTTGCTGGCATTCATTTTTTCACC
GAAGTATGGTTTGCTCCATCAACATAAACCCATCGCACAAGAAGAGGTGCAAAAATGA

Protein sequence : 
MWDLLLEPFSYDYMVKAILISSAVGGICAFLSAYLMLKGWSLIGDALSHSVVPGVAIAYALSLPYALGAFFSGILAAIAI
LWIKSITKLREDAVIGFIFTTFFALGLLIISLNPTSINVQDIILGNILGIADEDILQVGIIIGVCLVLLLIFWKDLLLIF
FDEVHATSVGFSPIYYKILFFTLLSACVVAALQTVGAILVIAMVITPGATAYLLTDRFKTLVLIAVVLGISSSSVGVYIS
YFLDGATGGVIVCIQTALFLLAFIFSPKYGLLHQHKPIAQEEVQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-57 60
sitC NP_461784.1 permease Virulence SPI-1 Protein 7e-57 60
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-57 60
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-57 60
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 5e-57 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_02111 YP_006287656.1 putative ABC-type chelated iron transport system, permease component BAC0441 Protein 5e-67 71
D7S_02111 YP_006287656.1 putative ABC-type chelated iron transport system, permease component BAC0351 Protein 3e-57 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_02111 YP_006287656.1 putative ABC-type chelated iron transport system, permease component VFG0527 Protein 3e-57 60