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Name : D7S_01722 (D7S_01722) Accession : YP_006287291.1 Strain : Aggregatibacter actinomycetemcomitans D7S-1 Genome accession: NC_017846 Putative virulence/resistance : Virulence Product : type IV pilus assembly protein Function : - COG functional category : - COG ID : - EC number : - Position : 1611392 - 1612801 bp Length : 1410 bp Strand : - Note : - DNA sequence : ATGCAAAATCTGATGGCGAAAGGTTATTTGATTCACAGCCAAAATCACGGGGACTTTACCATTGCGCCCGAGCTATGGCT TAAAAATCAACAACAACAAACCGTCCTGTTGCGTTATCTCGCCCTGCCCTTAGCGGAAAACGGGCAGACCTTGTGGCTCG GGTTAGACTCGTTAACTAACCTGAGCGCCTGTGAAGCCTTTTCTTTTCTCACCGGCAAAACCATTGAACCGGTATTAATT GAAAGCCAAACGCTAAAAACCGCATTGCAGGATTTATCCCCGCGCGTCGAAAAAGTCGAAGAAAATCAACCGCTCTTTTA TTCCGCACTGTCACAGGAACAGCCGACACAACCGTCTGACGAACCGATTATTCGGCTGTTAAATGATATTTTTGAAAGCG CGACGGCACAAAAAGCCTCCGATATTCATCTGGAACCGCAAGCAGACTGCCTGCAAACCCGTTTTCGCATTGACGGCGTG CTGCAGGTGCAAAACACCGTTCCCTTATCCATAGCGAGCCGACTGATTTCTCGTTTAAAATTATTGGCAAAACTGGATAT TAGCGAAACCCGCCTGCCGCAAGACGGACGCTTTCAGTTTAAAACGACGTTTTCCGACACGCTGGATTTTCGCCTTTCCA CCCTTGCCACCCAATTTGGTGAAAAAGCGGTCCTGCGTTTGCAACAAAATCGTCCCGTACAACTGGCATTCGGTGAATTG GGTATGACGGAATCGCAGCAACAGTGTTTTCGTCGTGCCTTGAGCCAACCACAAGGCTTGATTTTAGTCACCGGTCCGAC AGGCAGCGGCAAAAGTATTTCTTTATATACGGCGTTGCAGTACTTAAATACGTCTGAAAAACACATTATGACAGCGGAAG ATCCCATTGAAATTCAACTCCCCGGCATTATTCAGAGCCAGGTGAATCCGCCTATCGGGTTGGATTTCAGCCGATTGCTT CGCACCTTTTTACGCCAAGATCCGGACATTATTATGTTAGGTGAAATTCGTGATGAAGAAAGTGCCGCCATGGCGTTACG CGCCGCGCAAACGGGGCATTTAGTGCTTTCGACGCTGCATACCAACGACGCCCCTTCCGCCATTTCCCGCCTGCAACAAC TCGGCATTCAGCGCCATGAAATCGACGGCAGTTTGTTGCTGGTGATCGCCCAACGTTTGGTGCGCAAACGCTGCCAAAAG TGCGGTGGAAATGCCACGCGTTTTTGCGATTGCCATCAAGGTTACAAAGGACGAATCGGGATCTATCAATTCCTGCAACC GAATTTACAACATCCGCAGGGCTATGAAACGGATTTCGCCGATTTACGTCAAAGCGCTTTAGAAAAACTCAAAGATGGCA CCACAGATTTAACCGAAATCCAACGGGTATTAGGACAAGCCCATGACTAA Protein sequence : MQNLMAKGYLIHSQNHGDFTIAPELWLKNQQQQTVLLRYLALPLAENGQTLWLGLDSLTNLSACEAFSFLTGKTIEPVLI ESQTLKTALQDLSPRVEKVEENQPLFYSALSQEQPTQPSDEPIIRLLNDIFESATAQKASDIHLEPQADCLQTRFRIDGV LQVQNTVPLSIASRLISRLKLLAKLDISETRLPQDGRFQFKTTFSDTLDFRLSTLATQFGEKAVLRLQQNRPVQLAFGEL GMTESQQQCFRRALSQPQGLILVTGPTGSGKSISLYTALQYLNTSEKHIMTAEDPIEIQLPGIIQSQVNPPIGLDFSRLL RTFLRQDPDIIMLGEIRDEESAAMALRAAQTGHLVLSTLHTNDAPSAISRLQQLGIQRHEIDGSLLLVIAQRLVRKRCQK CGGNATRFCDCHQGYKGRIGIYQFLQPNLQHPQGYETDFADLRQSALEKLKDGTTDLTEIQRVLGQAHD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-60 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-60 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D7S_01722 | YP_006287291.1 | type IV pilus assembly protein | VFG2426 | Protein | 4e-62 | 43 |
| D7S_01722 | YP_006287291.1 | type IV pilus assembly protein | VFG1876 | Protein | 1e-65 | 42 |
| D7S_01722 | YP_006287291.1 | type IV pilus assembly protein | VFG0182 | Protein | 4e-64 | 42 |
| D7S_01722 | YP_006287291.1 | type IV pilus assembly protein | VFG2048 | Protein | 3e-61 | 42 |
| D7S_01722 | YP_006287291.1 | type IV pilus assembly protein | VFG0112 | Protein | 2e-75 | 41 |
| D7S_01722 | YP_006287291.1 | type IV pilus assembly protein | VFG0233 | Protein | 1e-61 | 41 |
