Gene Information

Name : D7S_01605 (D7S_01605)
Accession : YP_006287181.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1500763 - 1503363 bp
Length : 2601 bp
Strand : +
Note : -

DNA sequence :
ATGATTTTAGAAGATAATTTAACCCAACATACTCCCATGATGAAACAATATCTGCAACTTAAAGCAGAGAATCCGGATAT
TTTGTTATTTTATCGTATGGGCGATTTTTACGAGCTATTTTACGACGATGCAAAACGCGCCTCCGCCTTGTTGGATATTT
CCCTGACCAAGCGCGGGCAATCCGCCGGACAGCCGATTCCCATGGCGGGCGTGCCTTATCATGCGGTGGAAGGCTATTTG
GCGAAATTGGTGCAACTGGGTGAGTCGGTGGCGATTTGCGAGCAGGTCGGCGATCCGAATACCGCAAAAGGCCCTGTAGA
ACGCCAAATCGTGCGCATTGTCACACCGGGCACCGTGAGCGATGAAGCCCTCTTGCCGGAACGGCAGGATAATCTTATTG
CCGCCGTGTATCAGGAAAAAGATCATTTCGGTTTAGCCACGCTGGATATGACCTCCGGCCGTTTTCAAGTGTGCGAGCCG
CAATCCCCAGCAGATTTACAAACTGAATTACAGCGCATTGCGCCGGTGGAATTGCTTTATTGTGAAGATTTTGCCGATTT
TCAGCTAATTGAGCACGCCAAAGGTTTGCGTCGCCGTCCTATTTGGGAATTTGAGCTGAAAACCGCTATTCAACAGCTTT
GCCATCAATTTAATACCAAGGATTTACGTGGCTTCGGTGTGGAAAAAGCGATTTTGGGCTTATGCGCCGCCGGTTGTTTA
TTGCAGTACGCGCGCGAAACTCAACGCACCGCGTTGCCGCATATTCAGAGCATTTATCTGGTTCAACACAGCGAAAACAT
TCAACTGGACGCCGCAACCCGCCGCAACTTGGAACTCACTCAAAATCTGTCGGGGGGCACGGAAAATACGCTGGCAGCGG
TGTTGGATAAATGCGTTACGCCGATGGGAAGCCGCTTGCTCAAACGTTGGATTCACCAACCGATTTGCGATGTGGCGAAA
CTCATGCAACGCCAACAGGCCATCGGTGCGATTTTAGAACAGGATTTAGCGGCGGATTTGCAACCCTATTTACAACAGGT
TGGCGACATGGAACGTATTCTGGCACGCGTGGCGTTACGCACCGCCCGCCCGCGTGATTTAACCCGTTTACGCACCGCTT
TGGAGCAGATTCCTTATATTAAAAATCTGTTGGCTGAAAAAACGTCCGCCAAAATGACCGCACTTTACCAACAACTGGGT
GATTTTTCCGTGCAATTCGATCTCTTACAACGGGCGATCATTGAAAGCCCACCGGTCTTAATTCGCGACGGTGGTGTTAT
CGCGCCGGGCTATCATGCGGAATTGGATGAATGGCGTGCATTAGCTGATGGTGCCACACGTTATTTAGAAGAATTGGAAC
AGAAGGAGCGGGAAAGCACAGGAATCGATACGCTAAAAATCGGTTTCAATGCGGTGCACGGCTATTACATTCAAATCAGT
CAAGGACAGGCGCACAAAGCGCCGATTCATTATGTGCGTCGTCAAACCCTGAAAAATGCCGAACGCTATATTATTCCCGA
ACTTAAAACCTATGAAGATAAAGTGTTGAAGGCAAAAGGCGCTTCCTTGGCGTTGGAAAAACAGCTATATGATGAAATCT
TTGCTCAATTGTTACCGCACTTAAGCCGTCTGCAACTAGCCGGTTTAGCATTAGCCGAATTAGATGTGCTGACCAACTTA
GCGGAGCGGGCGGAGAATTTGAATTATGTGGCGCCGACGTTCTCAGAACAAACCGGCATTCATATTCGAAACGGACGCCA
TCCGGTGGTAGAACAAGTGCTGAAAGAACCGTTTATCGCCAACCCGACGAAGCTTACCGAACAGCAACATTTCCTCATCA
TTACCGGGCCGAACATGGGCGGTAAAAGCACCTATATGCGCCAAACCGCATTGATTACGCTGATGGCGTACATGGGCAGT
TTTGTACCGGCGGACAGCGCCGTTATCGGGCCGATTGATCGCATTTTTACCCGCATCGGTGCCTCCGATGATTTGGCTTC
CGGACGCTCAACCTTTATGGTGGAAATGACGGAAATGGCGAATATTTTGCATCAGGCAACGGAGAAAAGTTTGGTGTTAA
TTGATGAAATCGGACGTGGAACCTCCACTTATGATGGGTTGTCTCTGGCTTGGGCATGTGCCGAATGGCTGGCAAAAAAA
ATCCGTTCACTGACCCTGTTCGCCACACACTATTTTGAATTAACCATTCTGCCGGAACACGTCAGCGGTATCGGTAACAT
TCATTTAGATGCTATGGAACACAACGATACCATCGTATTTATGCATGCCGTGCAACAGGGCGCCGCAAGCAAAAGCTATG
GTTTAGCCGTAGCGGCTTTAGCCGGCGTTCCGCAGCAAGTGATCAAGCTGGCGAAGCAAAAACTCGCCCAACTGGAAAAA
TTGTCAAACCAAAACACCAATCAACAAATTCAGGATCTGCGTTTATTGAACCAACGCCAAGGTGAGTTAGCTTTTGAAAG
GGCAGAAGATGAGAATAAAGATATGCTGTTGCATATGTTACAAGAATTGGATCCTGACGAATTAAGCCCTAAACAGGCAT
TGGCTTATTTATATCAGCTGAAAAAAATGGTGAAAAATTAA

Protein sequence :
MILEDNLTQHTPMMKQYLQLKAENPDILLFYRMGDFYELFYDDAKRASALLDISLTKRGQSAGQPIPMAGVPYHAVEGYL
AKLVQLGESVAICEQVGDPNTAKGPVERQIVRIVTPGTVSDEALLPERQDNLIAAVYQEKDHFGLATLDMTSGRFQVCEP
QSPADLQTELQRIAPVELLYCEDFADFQLIEHAKGLRRRPIWEFELKTAIQQLCHQFNTKDLRGFGVEKAILGLCAAGCL
LQYARETQRTALPHIQSIYLVQHSENIQLDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAK
LMQRQQAIGAILEQDLAADLQPYLQQVGDMERILARVALRTARPRDLTRLRTALEQIPYIKNLLAEKTSAKMTALYQQLG
DFSVQFDLLQRAIIESPPVLIRDGGVIAPGYHAELDEWRALADGATRYLEELEQKERESTGIDTLKIGFNAVHGYYIQIS
QGQAHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDEIFAQLLPHLSRLQLAGLALAELDVLTNL
AERAENLNYVAPTFSEQTGIHIRNGRHPVVEQVLKEPFIANPTKLTEQQHFLIITGPNMGGKSTYMRQTALITLMAYMGS
FVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLVLIDEIGRGTSTYDGLSLAWACAEWLAKK
IRSLTLFATHYFELTILPEHVSGIGNIHLDAMEHNDTIVFMHAVQQGAASKSYGLAVAALAGVPQQVIKLAKQKLAQLEK
LSNQNTNQQIQDLRLLNQRQGELAFERAEDENKDMLLHMLQELDPDELSPKQALAYLYQLKKMVKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_01605 YP_006287181.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 69