Gene Information

Name : D7S_01506 (D7S_01506)
Accession : YP_006287090.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : iron-dicitrate transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1416063 - 1416830 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTATTGTTATCAACAACTTACAATTGGGTTATCAAAATAAAATCATCGTGCAGGATTTGTCGTTGGACTTTCCGCA
TAACCAAGTGATTGCCTTAATCGGACCGAACGGTTGCGGCAAATCCACCACCCTGAAAGCCATTGCCCGCCTGCTCAAAC
CGCGTACCGGCAAGATTACACATCATGGCAAAGATATTTGGCAAAGTACCCCGAAAGAATACGCCAAAGCCCTGTCTTTC
CTGCCGCAACAACATTTAGTGCCGGAGGGCATTAAAGTGCGTGAGTTGATCGCCTACGGTCGTTCGCCTTATTTAAATTT
ATGGGGCAAATTGAACGATAAAGATGAAGCGTTGGTCGCCTGGTCAATGGAACAAACCCACACCACAGAGTTGGCGGACA
GATTAGTTTCCGATTTATCCGGCGGTCAGCAACAACGGGTATTCTTAGCCATGACATTGGCGCAGGATGCGGAATTGGTT
TTATTGGACGAACCCACCACCTACCTTGATTTGAATCGCCAGGCGGAGCTCATGGGCATGATGCGCCAAATGCAACAAAA
CGGCAAAACCGTGATCACCGTTCTGCATGATTTAAACCAAGCCTCTCGTTACTGCAATTATTTAGTCGTGCTAAAAGACG
GCAACCTGGTGGCGAAAGGCACGCCGGATGAAGTGATGTCGGAAGAACTTTTGAAAACCGTGTTTGATCTGGATGTAGAG
ATTCATCGCGATCCGGTCAGCCAAACACCGATGTTTATTTTGAAATAA

Protein sequence : 
MSIVINNLQLGYQNKIIVQDLSLDFPHNQVIALIGPNGCGKSTTLKAIARLLKPRTGKITHHGKDIWQSTPKEYAKALSF
LPQQHLVPEGIKVRELIAYGRSPYLNLWGKLNDKDEALVAWSMEQTHTTELADRLVSDLSGGQQQRVFLAMTLAQDAELV
LLDEPTTYLDLNRQAELMGMMRQMQQNGKTVITVLHDLNQASRYCNYLVVLKDGNLVAKGTPDEVMSEELLKTVFDLDVE
IHRDPVSQTPMFILK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-66 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-43 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-43 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-43 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-43 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-51 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-51 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_01506 YP_006287090.1 iron-dicitrate transporter ATP-binding subunit BAC0164 Protein 2e-66 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_01506 YP_006287090.1 iron-dicitrate transporter ATP-binding subunit VFG1042 Protein 2e-66 51
D7S_01506 YP_006287090.1 iron-dicitrate transporter ATP-binding subunit VFG0925 Protein 1e-44 41