Gene Information

Name : D7S_01422 (D7S_01422)
Accession : YP_006287016.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1328882 - 1330126 bp
Length : 1245 bp
Strand : -
Note : -

DNA sequence :
ATGGCACGCACAATCACGCCGTTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTACCCTATCCGA
TGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGGTTTAACTATTACAAGCCTTTCACGCAAC
CAAAGAAAAGGGCGTTAATTGGCGTTGGCAAATACCCTGATATTTCCTTACAGCAGGCAAGAGCAATTAGAGAGGAATAT
TTATCTTTACTTGCGCAGAATATCGATCCGGCAATCTATCGCCAACAGCAAGAACAAGCTAAGCAAAATGAGCTGAATAA
TACCTATGAAGCAGTGGCGTGGGCGTGGCTTGAGTATCGCAAAACCAAAAAAAACTTTTCAGATAATTATCAAAAGGACG
TTATAAGCTTGATTAATCGTTGCTTATTGCCACATTTCGGACATTTACCCATTTCTCAAATTACCGCGCCAATGGCATTA
AAAGCATTTAAGCAATATCAAGATGAAGGACACTTAGAAAAGCTCAAACGGACGATTCAGAAGCATAACGAGATCATGAC
TTACGCCCTACACCGAGACTTAATTTCTTTTAATCCAACGGCGAATATCGCAAAGGAATTTGACAGCCCAACGGTTGAAC
ATTTTAAAACCCTTAAGCCTGAGGATTTAAGCGAATTTATGTCCACGCTACAAAACGCTCAGATTCACTTACAGACGCGT
TATTTGATTTTATGGCAACTGCTCACCATGACAAGACCGAACGAAGCGGCTACGGCGAAATGGGCGGATATTGACGAGAA
AAACAGAATATGGACGATTCCGGCGGAGCAAATGAAACGCGGCATTGAACATAGAATCACGTTATCACGGCAAGCCTTAG
CCCTGTTAGGGCAAATTAAAAAATTGAGTGGCGGAAAAACTTACCTATTCCCCAGTGTAAAGAACCCACAATCCCACGTA
AACACGCAAACGGCAAATGCCGCGATTAAGAGAATGGGCTATGCCGGTAAATTAGTGGCACACGGTTTACGTAGTATCGC
CAGCACCTATTTAAACGATCAGGGCTTTAATAGTGATTTGATTGAGGTAGCACTATCACACCTCAATTCAGACCGAGTAA
AAACCGCCTATGACAGAGGGGAAAAATTAGAACAGCGATTCAAGCTATTACAGGCATGGGCGGATTTTGTAGAACAATCC
GCACAAGGCACTTTGCCGCAATTTCATTTGAAGATTGTGGCTTAG

Protein sequence :
MARTITPLNSTKIDKAKPQEKEFTLSDGKGLYLLVKPNGAKLWRFNYYKPFTQPKKRALIGVGKYPDISLQQARAIREEY
LSLLAQNIDPAIYRQQQEQAKQNELNNTYEAVAWAWLEYRKTKKNFSDNYQKDVISLINRCLLPHFGHLPISQITAPMAL
KAFKQYQDEGHLEKLKRTIQKHNEIMTYALHRDLISFNPTANIAKEFDSPTVEHFKTLKPEDLSEFMSTLQNAQIHLQTR
YLILWQLLTMTRPNEAATAKWADIDEKNRIWTIPAEQMKRGIEHRITLSRQALALLGQIKKLSGGKTYLFPSVKNPQSHV
NTQTANAAIKRMGYAGKLVAHGLRSIASTYLNDQGFNSDLIEVALSHLNSDRVKTAYDRGEKLEQRFKLLQAWADFVEQS
AQGTLPQFHLKIVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 8e-77 46
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-79 44
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-79 44
int AAK20773.1 integrase Not tested VPI Protein 1e-79 44
int AAK20803.1 integrase Not tested VPI Protein 1e-79 44
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-79 44