Gene Information

Name : D7S_01362 (D7S_01362)
Accession : YP_006286959.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Unknown
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1277735 - 1280305 bp
Length : 2571 bp
Strand : -
Note : -

DNA sequence :
ATGAATATTGAAAAATTTACCACAAAATTCCAACAAGCCTTGGCGGAAGCGCAATCTTTGGCGGTCGGCAAGGATAATCA
ATTTATTGAACCGGTACATTTATTGAGCGCCTTGTTAAATCAACAAGACGGTTTCATAGCACCGATTCTCACCACCGGCG
GCGTGAACGTCGCTTTATTGCGTAACGAAATCAACAACGAGCTTGCCAAGCTCCCGCAAGTGTCCGGCAACGGCGGCGAT
GTGCAAATTTCCCGTCAGTTGCTTAACATCTTGAATTTATGTGACAAATTGGCACAACAACGGCAGGATAAATTCATTTC
GTCCGAAATCTTTTTGCTTGCCGCTTTAGAAGAAAAAGGCACCCTGAGCGAGATTTTGAAAAAGTGCGGTGCGAAAAAAG
AACAGATTTTACAAGCCATCGAGCAGATTCGCGGAGGACAAAAAGTGAATGATCAAAATGCGGAAGAAAGCCGCCAAGCA
CTCGAAAAATATACTATCGACTTAACCGCCTGCGCAGAAAGCGGCAAATTGGATCCGGTGATTGGGCGTGATGAAGAAAT
CCGCCGCACCATTCAAGTGCTGCAACGCCGCACCAAAAACAACCCTGTATTAATTGGTGAACCGGGCGTGGGTAAAACCG
CCATTGTGGAAGGTTTGGCACAACGTATCGTGAACGGCGAAGTGCCGGAAGGCTTGAAAAACAAACGTGTGCTGTCGCTG
GACATGGGCGCGTTAATCGCCGGGGCGAAATATCGAGGCGAATTTGAAGAACGCTTGAAAGCGGTGTTAAACGAACTCGC
CAAAGAAGAAGGCAGAGTGATTTTGTTCATCGATGAAATTCACACCATGGTGGGCGCGGGTAAAACTGACGGCGCGATGG
ATGCAGGCAACCTGCTCAAACCAAGTTTGGCGCGCGGTGAATTGCACTGCGTGGGTGCCACTACCTTGGACGAATATCGT
CAATACATTGAAAAAGACGCGGCGCTTGAACGTCGTTTCCAAAAAGTGTTTGTGGGTGAGCCGAGCGTGGAAGATACCAT
CGCCATTTTGCGCGGTTTGAAAGAGCGTTATGAAATCCACCACCATGTACAAATTACCGACCCGGCAATCGTGGCGGCGG
CAACGCTTTCTCATCGTTATATTTCCGATCGTCAGTTGCCGGATAAAGCCATCGACTTAATCGACGAAGCAGCATCCAGC
ATTCGGATGGAAATCGACTCCAAACCGCAACCGTTAGATCGTTTGGATCGCCGTATTATCCAGCTCAAACTGGAACAACA
GGCGTTGCAAAAAGAAGATGACGATGCCAGCCGTAAACGTTTGGAAATGCTGGAAAAAGAATTGGCGGAAAAAGAACGTG
AATATGCCGAATTAGAAGAAGTGTGGAAATCGGAAAAAGCCGCGCTGTCCGGCACGCAACACATTAAAGCGGAATTGGAA
AATGCCCGCACGCAAATGGAACAAGCACGCCGCGCCGGTGATTTAAGCAAAATGTCCGAATTGCAATACGGCAAAATTCC
GGATTTGGAAAAACAATTAGCCCAAGCGGAAGGTGCCGAGGGCAAAGAAATGAGTCTGTTACGCTATCGCGTGACCGACG
AAGAAATCGCCGAAGTGCTTTCCCGCGCTACCGGTATTCCGGTCGCTAAAATGATGGAAGGCGAAAAAGAAAAATTATTG
CGCATGGAAGAATTCCTGCACAAACGGGTTATCGGTCAAAACGAAGCGGTGGATGCCGTGGCGAACGCTATTCGTCGTAG
CCGCGCCGGTCTTTCCGATCCGAATCGTCCGATTGGTTCCTTCTTATTCTTAGGTCCGACCGGTGTGGGTAAAACTGAGT
TGTGCAAAGCCTTGGCGTCCTTCTTATTCGACAGCGAAGATGCCATGGTGCGTATTGATATGTCCGAGTTCATGGAAAAA
CACAGCGTGTCCCGTTTGGTGGGCGCACCTCCGGGCTATGTGGGCTATGAAGAAGGCGGTTACTTAACCGAAGCGGTGCG
TCGCCGTCCGTATTCCGTGATTTTGCTCGACGAAGTGGAAAAAGCGCATCACGATGTGTTTAACATTCTGTTGCAAGTGC
TGGACGACGGTCGTCTCACCGACGGACAAGGCAGAACCGTGGATTTCCGTAATACGGTGGTGATTATGACCTCCAACCTC
GGTTCCGACTTGATTCAGGAACACGCACAGGAAGGGTACGACACCGTGAAAAGCATGGTAATGGAAGTGGTCGGTCGTTA
TTTCCGTCCGGAATTTATCAACCGTATCGACGAAACCGTCATGTTCCACCCGTTGAACAAAGAAAATATTCGTCAAATCG
CCGATATTCAATTAAGACGCTTAACCCGTCGCATGGAAACCCATGGCTATGTGTTGAATTTTACCGATGCCACCCTCGAT
TTCATCAGCGACATCGGTTACGACCCGATTTTCGGTGCACGTCCGCTCAAACGGGCAATTCAACAAGAAATCGAAAATCC
GTTGGCACAACAAATTTTATCCGGCGCCTTGCTGCCTGATAAAGTGATTGATGTGGACTACGTGGACGGTCAAATTGTGG
CAAAACAATAG

Protein sequence :
MNIEKFTTKFQQALAEAQSLAVGKDNQFIEPVHLLSALLNQQDGFIAPILTTGGVNVALLRNEINNELAKLPQVSGNGGD
VQISRQLLNILNLCDKLAQQRQDKFISSEIFLLAALEEKGTLSEILKKCGAKKEQILQAIEQIRGGQKVNDQNAEESRQA
LEKYTIDLTACAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL
DMGALIAGAKYRGEFEERLKAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS
IRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELE
NARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLL
RMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQEHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDATLD
FISDIGYDPIFGARPLKRAIQQEIENPLAQQILSGALLPDKVIDVDYVDGQIVAKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-158 44