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Name : W5S_0971 (W5S_0971) Accession : YP_006281961.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : Type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 1073829 - 1076426 bp Length : 2598 bp Strand : + Note : - DNA sequence : GTGATTCGAATTGAACTGCCGACACTGGTTGAACGACTCAACCCCGTGTGCCGTCATATGCTGGAAGAAGCGGCGGCACT CTGTATTCAGCATCAGGGTGCGGAAATCCGTATTGAGCACTTGTTGATGAAAATGCTGGAAACGCCGCTGTGTGATGTGC GGCAGATCCTCAAGCGTGCGGGCGTTGATGCGGATGAGTTGTCTTCGCTGCTGTTGCCTTCCTCCGTGGATAAAGAATTT GACGCGGGCTATCCCTCATTCTCCCCTCTGCTGGTGGAGTGGTTACAGGATAGCTGGCTGCTGGCCTCGGCTGAGTTTCA GCACGTGCGTCTGCGCAGCGGCATATTGTTGCTGGTCTTGCTGCTGACGCCCAATCGCTATGTGGCAGGCGCGGTGTCCC GCCCGCTGGCGCAGATTAACCGTGAACTTTTACGCCAGCAGTTTGATGAGTGGGTGAAAGATTCGGTGGAAACGGACGTC GCGGTGCAGTCCGCCACGGCCGAACAGGCAGCCGCGGCGAACACGCAGCTCTCGCGCTATACGCAAAATGTGACGGAATC CGCTCGACAAGGGCAGTTGGACCCGGTGTTGTGCCGCGACCATGAAATCGATCTGATGATCGATATTCTCTCCCGTCGTC GTAAAAACAACCCGATTGTCGTGGGGGAAGCGGGTGTTGGTAAAAGTGCGCTGATCGAAGGGCTGGCGCTGCGTATTGTG GCGGGTGCCGTGCCGGAAAGACTACGAGATGTAGAACTGCTTACGCTCGATTTGGGGGCGATGCAGGCGGGTGCGTCAGT TAAAGGCGAATTTGAGAAACGCTTCAAAGGTGTGATGCAGGAAGTGAAGGATGCGCCACGCCCGATCATTCTATTTATTG ATGAAGCGCATACGCTAATCGGGGCAGGCAATCAGGCCGGTGGGCTGGATGTGTCCAATCTGCTTAAGCCTGCGCTGGCG CGTGGTGAGCTGCGTACCATCGCGGCAACCACCTGGAGCGAATACAAAAAATATGTCGAGAAGGACGCTGCGCTTTCCCG TCGCTTCCAGCTCGTCAAAGTCGGTGAACCGAACGCGGAAGAAGCCACGGTGATCCTGCGTGGGCTGCGCGGTATCTATG AAAAAGCACATGGCGTCCTGATTGATGAAGATGCGCTTCAGGCGGCGGCGCAACTGTCGGCGCGCTATATCTCTGGTCGC CAACTCCCCGATAAAGCGATTGACGTGCTGGATACCGCGAGTGCGCGCGTAGCCATTAACCTGACGACACCACCGCGTGC CGTCAGCCAGCTACAGACCCGTCTACGCCAGCAGGAAATGGAAATCACCCAGCTTGAGCGGCAGGCGCGCATCGGTCTGG GCAATACCGAAGACCGCTTAGTGGAACTGCGTAATGCTCGCGAAGCCGGCGCGGCACAGTTGGTACAGTTAGAAGCCGAT TGGCAGCAGCAGAAAACGCAGGTTCAGCGCGTGATTGAACTGCGCACGGCGTTGCTGGATGAAGATCAAGCCGTCGATTT CGATGCTGTGTCGGCTGCGGCGGAACTGGCGGACTGCGAACAGGCGCTGGAAGCGTTGCAACAATCCTCCGTGCTGGTCT CTCCTCACGTTGATAAAACACAGATTGCTGCCGTGATAGCTGAGTGGACGGGCGTGCCGCTTAACCGAATCTCGCAGGGT GAAATGGATATCGTCACGCGCCTGCCTGAATTCCTGGGTGAAACGATTAAAGGACAGCAGTTGGCGATTGCTCAATTGCA TAAACATTTGCTGACCGCGCGTGCGGATCTTCGTCGTCCTGGGCGTCCGTTGGGGGCTTTCCTGCTGGTGGGGCCGAGCG GCGTGGGTAAAACGGAAACCGTGGTCCAGATTGCCGACCTGATGTTTGGCGGACGTAACTATCTGACCACCATCAATATG TCGGAATATCAGGAGAAACATACCGTTTCACGCCTGATCGGTTCGCCGCCGGGCTACGTCGGGTTTGGTGAGGGGGGCGT ATTGACCGAAGCGATCCGCCAGAAACCGTATTCCGTGGTACTGCTGGATGAAGTGGAAAAAGCACACCCGGATGTCCTGA ATCTGTTCTATCAGGCCTTTGATAAAGGTGAACTGGCCGACGGTGAAGGCCGGGTCATCGACTGCCGCAATGTGGTGTTT TTCCTGACGTCCAATCTCGGGTTCCAGACGATCGTGAACTACGCCGAGCAGTCGGATGTGTTGCTGGATGCGCTCTATCC TGAGCTGGCGGCTTTCTTTAAACCTGCACTATTGGCGCGTATGGAAGTCATCCCTTATCTGCCGCTGGCGCATGCCACCA TGGTCGAGATCGTACAGGGTAAATTGTCGCGTCTGGTTTCTCTGCTGCAACAGCGCTTTAGTGCTGAGGTCATCATTGAG GATGAGGTGCCGGAAGAAATTCTCCGGTTGGCAAACCGCAGCGAAAACGGGGCGCGTATGCTGGAGTCAGTGATTGATGG GGCATTGCTGCCACCGGTATCACTACAACTGCTGCAACGACTGTCTGCGGGGGAACCCGTCAGCCGTATTCATTTCCGCG TCGAAGCCGGCCAGTTCCAGACCGAGGTGGAGGGCTGA Protein sequence : MIRIELPTLVERLNPVCRHMLEEAAALCIQHQGAEIRIEHLLMKMLETPLCDVRQILKRAGVDADELSSLLLPSSVDKEF DAGYPSFSPLLVEWLQDSWLLASAEFQHVRLRSGILLLVLLLTPNRYVAGAVSRPLAQINRELLRQQFDEWVKDSVETDV AVQSATAEQAAAANTQLSRYTQNVTESARQGQLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGLALRIV AGAVPERLRDVELLTLDLGAMQAGASVKGEFEKRFKGVMQEVKDAPRPIILFIDEAHTLIGAGNQAGGLDVSNLLKPALA RGELRTIAATTWSEYKKYVEKDAALSRRFQLVKVGEPNAEEATVILRGLRGIYEKAHGVLIDEDALQAAAQLSARYISGR QLPDKAIDVLDTASARVAINLTTPPRAVSQLQTRLRQQEMEITQLERQARIGLGNTEDRLVELRNAREAGAAQLVQLEAD WQQQKTQVQRVIELRTALLDEDQAVDFDAVSAAAELADCEQALEALQQSSVLVSPHVDKTQIAAVIAEWTGVPLNRISQG EMDIVTRLPEFLGETIKGQQLAIAQLHKHLLTARADLRRPGRPLGAFLLVGPSGVGKTETVVQIADLMFGGRNYLTTINM SEYQEKHTVSRLIGSPPGYVGFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRVIDCRNVVF FLTSNLGFQTIVNYAEQSDVLLDALYPELAAFFKPALLARMEVIPYLPLAHATMVEIVQGKLSRLVSLLQQRFSAEVIIE DEVPEEILRLANRSENGARMLESVIDGALLPPVSLQLLQRLSAGEPVSRIHFRVEAGQFQTEVEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 64 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 64 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-130 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_0971 | YP_006281961.1 | Type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 0.0 | 61 |
| W5S_0971 | YP_006281961.1 | Type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 5e-145 | 42 |
| W5S_0971 | YP_006281961.1 | Type VI secretion ATPase, ClpV1 family | VFG0079 | Protein | 9e-108 | 41 |
