Gene Information

Name : W5S_0970 (W5S_0970)
Accession : YP_006281960.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : ImpK/VasF outer membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1073039 - 1073815 bp
Length : 777 bp
Strand : +
Note : -

DNA sequence :
ATGAGCATCGAGGTTATTAAGAACGATCAACTGGGCGATCTGCTTTTTGACCACGCCCGACAGTTGGATATGGATTCCGA
CTACTGGTTCCGCCTGCGTGGACAAAGCATTAATCCGATGATTGATGCCGTTACGCCGTTATTGGGCATGGTGGAGCGGG
TACGCCAGCTCTCTGCCTATGAGGGCGTGGAGGATCTCTATCAGCGCGTGGTATCTGAAGTTCAGGCTATCGAACAGGAA
TTGCACTCTCATAGCTATGAGAACGGTGTGATCCTGTCTTTCCGCTACATCCTCTGCACGTTTATTGATGAAGCCGTGAT
GGGGCGGGAGTGGGGTGGACAAAGCATGTGGTCGGCACACTCTCTGCTGACTCGTTTTCATAATGAGACCTGGGGGGGCG
AAAAGGTTTTCGTCCTGCTAGAGAAGCTGTTGGACGATCCTACCCGCTATCGCGACATTCTGGAGTTTATCTACCTCTGC
CTTTGTCTGGGCTTTGAAGGGCGCTATCGGGTGATGACTCAAGGGCGTGAAGAGCTGGATCGCGTCGTGAGTAAGCTACA
TGACACCCTGCGCCCTGAGCCTACGAATGCGCCAACGGTATTCCACCTGAATCTGGGGCAGCAGGCCTCGCGCTACCAAC
TGCGTAGGCAGGTGTCATTGCGCACGTTGTTTATCGGCGTGTGTGTAGCTTTGGTGGCCGCATTCGGCCTGTACCGTTAC
CAGCTTACTCATCAGACCCAGGACGTACTGCGTCAACTGGGAGAATTATTACAATAA

Protein sequence :
MSIEVIKNDQLGDLLFDHARQLDMDSDYWFRLRGQSINPMIDAVTPLLGMVERVRQLSAYEGVEDLYQRVVSEVQAIEQE
LHSHSYENGVILSFRYILCTFIDEAVMGREWGGQSMWSAHSLLTRFHNETWGGEKVFVLLEKLLDDPTRYRDILEFIYLC
LCLGFEGRYRVMTQGREELDRVVSKLHDTLRPEPTNAPTVFHLNLGQQASRYQLRRQVSLRTLFIGVCVALVAAFGLYRY
QLTHQTQDVLRQLGELLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec26 YP_851419.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-57 49
aec26 AAQ96720.1 Aec26 Not tested AGI-1 Protein 2e-57 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_0970 YP_006281960.1 ImpK/VasF outer membrane protein VFG2083 Protein 3e-59 46