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Name : W5S_0969 (W5S_0969) Accession : YP_006281959.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : Type VI secretion protein, VC_A0114 family Function : - COG functional category : - COG ID : - EC number : - Position : 1071686 - 1073023 bp Length : 1338 bp Strand : + Note : - DNA sequence : ATGTCGAGTCGCAATCGCATTATCTGGCGGGAAGGTTTGTTCATTAAACCGCAACATTTTCAACAGCAGCAAAGACATAC CGATTACGCATTGCATGCGCGTCTCAGCGCACTGAGTGATTATTTTTATGGCTTGCAATCGCTGGAGATTAATGAGGAAT ACCTCAATTTTGGCCGCATCGCACTGGTTAATGCCAGCGGGGTGATGCCTGATGGCACCGTGTTCAATATTCCGGGCGAT GACGCCTTGCCGCTGCCGTTGGAGATCACCGACGTCGCGCTGGCAAACCAGAAAGTGTATCTGGCACTACCGCTGGCGGT AAATGGCGTCAGCGAAGTGGGCCAACCGGGACAGGGGATCGCCAGCCGTTTGCAATCACACCGGCATGACGTGCGCGATC TGCATAGCGACGGCGGCGATATCGTTTCTCTGGAGGTCGGCAAGGTTAGTCTGCGGTTGATGCTCGATCGTGACGATCGC AGCGCCTATGCCTCGCTGGCGATTGCCAACATTCTGGATAAACGCCCTGACGGCGGCTTGATCCTGGATCCTAATTTTAT GCCATGCAGCATCAGCGTTACGGCGATCCCTGCCTTAAAACGCTTCCTGGGGGAATCTGCCGGTCTGGTTGCCGAACGTG CGCGCAGTCTGGCGCAGCGTATTGCCGCGCCGGGGCAACAGGGCGTGGCGGACGTAGCGGAATTCATGATGCTGCAATTG CTTAACCGCGCCCAGCCCAGATTGTCGCATCTGGCCCGCCTTGGCACGCTACACCCCGAGCGCCTGCACGAGGCGTTAGT CGAGCTGTGTGGTGAACTGATGACGTTTACCGATGAGTCGCGCCTGCCGCCTGAATTCCCGGCCTATCGTCATGAACATC AGCAAGCCAGCTTTGAGCCGCTGATGATGGCGCTGCGTCAAGCCCTGAGCACCGTACTGTCACCGCGTGCCGTTTCCATC CAACTGAAGAAACAGCCGTATGGCGTGATGGTGGCGATGGTTGGCGATGCGGAATTGATGGCCAGCGCCGAGTTTGTACT GGCGGTGCGTGCGCGTATGCCGCAGGAGCATCTGCGTAAACAACTGCTGCAACAAACGAAAATTGCCTCCAGCGAGAAGA TCCGCGAACTGATCAGCCTACAACTGCCTGGCATTCCACTGCTGCCGCTGCCGGTTGCACCGCGTCAACTGCCTTATCAC GCGGGTTACAGCTATTTCCAACTGGATAGGCAAAGCCCCGCCTGGCAAGTGCTGGTATCTGGCAATACGTTGGCGTTCCA CATTGCTGGCGAGTTCCCGGAACTGGATATGCAGCTTTGGGCCATCCGCGGTCAGTAG Protein sequence : MSSRNRIIWREGLFIKPQHFQQQQRHTDYALHARLSALSDYFYGLQSLEINEEYLNFGRIALVNASGVMPDGTVFNIPGD DALPLPLEITDVALANQKVYLALPLAVNGVSEVGQPGQGIASRLQSHRHDVRDLHSDGGDIVSLEVGKVSLRLMLDRDDR SAYASLAIANILDKRPDGGLILDPNFMPCSISVTAIPALKRFLGESAGLVAERARSLAQRIAAPGQQGVADVAEFMMLQL LNRAQPRLSHLARLGTLHPERLHEALVELCGELMTFTDESRLPPEFPAYRHEHQQASFEPLMMALRQALSTVLSPRAVSI QLKKQPYGVMVAMVGDAELMASAEFVLAVRARMPQEHLRKQLLQQTKIASSEKIRELISLQLPGIPLLPLPVAPRQLPYH AGYSYFQLDRQSPAWQVLVSGNTLAFHIAGEFPELDMQLWAIRGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec25 | YP_851420.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 1e-90 | 47 |
| aec25 | AAQ96719.1 | Aec25 | Not tested | AGI-1 | Protein | 7e-91 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_0969 | YP_006281959.1 | Type VI secretion protein, VC_A0114 family | VFG2082 | Protein | 3e-132 | 61 |
| W5S_0969 | YP_006281959.1 | Type VI secretion protein, VC_A0114 family | VFG2065 | Protein | 2e-90 | 44 |
