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Name : W5S_0965 (W5S_0965) Accession : YP_006281955.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : Type VI secretion protein, VC_A0110 family Function : - COG functional category : - COG ID : - EC number : - Position : 1067211 - 1068977 bp Length : 1767 bp Strand : + Note : - DNA sequence : ATGTCACTGGAACATTTTTTCAGGGATGAGCTGACTTACTTGCGCCTGCAAGGGCGCGAATTCGCCAAGGCGCACCCTGA GCTTACCCGATTTTTGTCAGAACAAACCACGGATCCAGACGTTGAGCGACTGCTGGAAGGGTTCGCCTTTTTGACAGGGA GCCTGCGGGCGAAGATCGAGGATGAATTTCCGGAACTGACACACGGTCTGCTGGGCATGCTCTGGCCTAATTACCTGCGT CCAGTACCGAGCATGACGATGATGCAATTTTCGGTGCATCCCGGCGCGATTGCACAGCCCGCATTTGTTGAGCGCGGTTG TGAACTCGATAGCCTGCCGATTGATGATGTGGTCTGCCATTTTCAGACCTGTCACGATATCTGGATTTATCCGGCGGATA TCCGCGAGATTAAGGTACAAAGCGGTAACGATCTTTCCACCATTACGCTGGATATAGGGTTGCATGGCCCGTTATCGCTA AGCGATCTGCAACTCGACAAGCTGCGCTTTTATCTGGGCGGCGATACCTATACGGCCTACGAACTCTATTTCTGGATCGC CAGCCAACTGTCGCATATTGAGCTGGAAGTCGATGGCCAACGCTTCCGTCAAGAGGCCAGCGTGCTGAAGACGGTCGGCT TCGAGCGAGAAGATGCGCTATTACCGTATCCCGGCAATGTCTATTCGGGCTACCGCATCCTGCAGGAATACTTTTGCTTT CCTGAAAGTTTTCTCTTTTTCCAACTTGCTGGCGCGGTATGGCCGGATCTTCCGCTGACGGTAACGGAGTTCCGTCTGCA TTTTTGTTTTGATCGTCCGTTGCCAGCGGAGCTGAAGATCCGTCCTGATTCATTCATGCTCAACTGCGTGCCTGCAATCA ATCTCTTCCGACACGATAGCGAGCCGATCAACCTTAGCGGACGTCAGACGGATTACCCGCTGAAGGCCAGTTACCGTAAC GCCGATAGCTTTGAAATCTTCTCTGTGGATAAGGTTGAGGGGTGGGTTGAAGGCAATTCAGGTCGTGCTCGGGGTATCCC ACGCACGTATCAGCCCTTTGAGAGCTTTCAGCACCAAATCGAGCGAGCTAAAGGGCGATTGGCGCTCTATTACCGTATTC GGATAAGAGAAGCGGTGAACGGCAATGGTTTTGAACACATGCTCTCTTTTGTGCGGGGCGATGAGCGGGAAGTCATTGAT TTGGATGAATCCATCTCGGTGACTCTGACCTGTACCAATCGGTCGCGTGCGGCACAACTGCCCGTTGGGGCGATTTGTGT ACCAGCCGGTAACTCACCGTCTTTCGCGACGTTTCGTAATTTGTTACGGCCAACGCGGCCACTGCGGCCTGCGATGGATG GCAGCCTGCATTGGACGCTGATCTCCAACCTGTCGCTGAACTATGTGTCGCTGCTGCGGCGTGATGCGTTGGTACAGATC CTACGTACCTACGATTTCCCAGCGCTGCACGACAAGCAGGCGGAACAAGCCTCGCGTAAGCGTCTGGCGGGTATCGAGTC TATCGAAACCACGCCTATCGATCGCCTGGTTCAGGGGATGCCGGTTCGTGGCTTGAAATCAATCCTGTCTGTACGGCAAT CCGCGTTTTCCAGTGAAGGAGAACTGTACCTGTTTAGCACGGTGCTGGCGCACTTTTTCTCGCTATACGCCAGCGTCAAC GCTTTCCACCTGTTGGAAGTGGTCAACATCGATAACAAGGAGCGCTACCGATGGCCGGTACAGATAGGTCAACACTCAAT GATGTAA Protein sequence : MSLEHFFRDELTYLRLQGREFAKAHPELTRFLSEQTTDPDVERLLEGFAFLTGSLRAKIEDEFPELTHGLLGMLWPNYLR PVPSMTMMQFSVHPGAIAQPAFVERGCELDSLPIDDVVCHFQTCHDIWIYPADIREIKVQSGNDLSTITLDIGLHGPLSL SDLQLDKLRFYLGGDTYTAYELYFWIASQLSHIELEVDGQRFRQEASVLKTVGFEREDALLPYPGNVYSGYRILQEYFCF PESFLFFQLAGAVWPDLPLTVTEFRLHFCFDRPLPAELKIRPDSFMLNCVPAINLFRHDSEPINLSGRQTDYPLKASYRN ADSFEIFSVDKVEGWVEGNSGRARGIPRTYQPFESFQHQIERAKGRLALYYRIRIREAVNGNGFEHMLSFVRGDEREVID LDESISVTLTCTNRSRAAQLPVGAICVPAGNSPSFATFRNLLRPTRPLRPAMDGSLHWTLISNLSLNYVSLLRRDALVQI LRTYDFPALHDKQAEQASRKRLAGIESIETTPIDRLVQGMPVRGLKSILSVRQSAFSSEGELYLFSTVLAHFFSLYASVN AFHLLEVVNIDNKERYRWPVQIGQHSMM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1761 | YP_851424.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 4e-124 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_0965 | YP_006281955.1 | Type VI secretion protein, VC_A0110 family | VFG2078 | Protein | 1e-154 | 51 |
