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Name : W5S_0952 (W5S_0952) Accession : YP_006281942.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : Chaperone protein PapD Function : - COG functional category : - COG ID : - EC number : - Position : 1054436 - 1055185 bp Length : 750 bp Strand : - Note : - DNA sequence : ATGAAATGCCCATTTTATCAGCGAGCAGCGGGATTTATTATCAGTTACTTGTTTTTGATACCCTCAGCCTATAGCACCCT GAGCCTCGATCGCACCCGCGTTATTTTTAACGATGAGGAACAATCCGCAACGGTGATGCTGATGAACCCGAATGCGGAAC ATCCGATTCTGGCACATTCCTGGCTGACGGACGATCAGCACAATAAAGTGACCACGCCGCTGATGGTACTGCCGCCGTTA CAGCGCATCGAAGCGAAAGGATATAGCCTGACTCGTCTGGTTAAAACTGAACAAATCACCCAATTGCCGACCGATCGCGA ATCGCTGTTTTACCTTAACGTCCGAGAAATTCTGCCAAAAACAGAAAAGGTCAACGTATTGCAGATCGCCATTCAGTCTG AAATCAAAGTGTTCTTCCGCCCGCGTGGTGTAAAACCTGGAAAAGATGAGATATGGCAGAAAAAACTGCTTATAAAAAAA ACAGGCAACACGTTTCAGGTAGAAAATCCAACACCGTACTACATCACGGTAAGCAGCATCTTGAAGCAGCCCAAAACGAC TCACGCCAAGCCTGCCAACCTATTAAAGAGAAACGCCTTTATGGTAGCGCCACGCTCAACGTTGTCTGTTGAGGTCAATA ACGGCGCGATCAATCATTTCTATCTGTACTACGTCAACGACCACGGTGCCTATGTGCCGTTGCCCTTTACCTGCGCACAA AACCAGTGTCAGCCCGTTCCTCATGAATAA Protein sequence : MKCPFYQRAAGFIISYLFLIPSAYSTLSLDRTRVIFNDEEQSATVMLMNPNAEHPILAHSWLTDDQHNKVTTPLMVLPPL QRIEAKGYSLTRLVKTEQITQLPTDRESLFYLNVREILPKTEKVNVLQIAIQSEIKVFFRPRGVKPGKDEIWQKKLLIKK TGNTFQVENPTPYYITVSSILKQPKTTHAKPANLLKRNAFMVAPRSTLSVEVNNGAINHFYLYYVNDHGAYVPLPFTCAQ NQCQPVPHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 1e-45 | 42 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 1e-43 | 41 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-43 | 41 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 3e-43 | 41 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 3e-43 | 41 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 2e-43 | 41 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 2e-43 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_0952 | YP_006281942.1 | Chaperone protein PapD | VFG1547 | Protein | 7e-44 | 41 |
| W5S_0952 | YP_006281942.1 | Chaperone protein PapD | VFG0896 | Protein | 1e-43 | 41 |
