Gene Information

Name : W5S_0927 (W5S_0927)
Accession : YP_006281917.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Cytochrome c nitrite reductase, Fe-S protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1023466 - 1024164 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGAATTATCTCGCCGTCGTTTTATTGCCTATATGGGAAGTGCGATTGCCGTTAGTGGAAATATCGGTCTCGCACA
CGCGCAAAATGAGCCAGAAAAAACGCAGGGTAAATTAGCCGTTAAATATGGTTTATTACATAACGAAATGCGTTGTATTG
GATGCAAAGCCTGTATCAAGGCCTGCAAAGAGACGAATAACGTCCCTGATGGCGTAGCCCGGCTGGACATACTGCAAACC
GTCGATATTCCCGCCGTCGAGAAAACGCGTGCCATCAAGCAATTTTTCCGTAAGTCCTGCCAGCACTGTGAGAATCCCCC
CTGCGTTGCCGTCTGTCCAACGGGCGCGTCCTTCAAAGATGCGCTCACTGGCATTGTCGACGTCAACGATAAACGGTGCG
TAGGCTGCCGCTACTGCATTGCCGCGTGCCCTTATCATGTGCGCTTCATCAACCCCGTCACGAAAACGGCAGATAAATGC
AATTTTTGTCGCGAATCCAATCTGGCCGCCGGGAAACAGCCCGCTTGCGTCGAGATTTGCCCCACCAAAGCCTTGGTATT
TGGCGACCTCAACGATCCTGAGAGCAACATTGCCAAGATGATCGAGAGCAACGCGACCTACCGTTCCAAGGTTTATCTGG
GTACCGAGCCTCAACTCTATCGTATTCCTGGAAAACGAGGGGTAATCGACAATGCATAA

Protein sequence : 
MEELSRRRFIAYMGSAIAVSGNIGLAHAQNEPEKTQGKLAVKYGLLHNEMRCIGCKACIKACKETNNVPDGVARLDILQT
VDIPAVEKTRAIKQFFRKSCQHCENPPCVAVCPTGASFKDALTGIVDVNDKRCVGCRYCIAACPYHVRFINPVTKTADKC
NFCRESNLAAGKQPACVEICPTKALVFGDLNDPESNIAKMIESNATYRSKVYLGTEPQLYRIPGKRGVIDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-28 42
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-28 42
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 1e-28 42
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-28 42
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_0927 YP_006281917.1 Cytochrome c nitrite reductase, Fe-S protein VFG0486 Protein 7e-29 42