Gene Information

Name : W5S_0842 (W5S_0842)
Accession : YP_006281832.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Ferric aerobactin receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 930154 - 932352 bp
Length : 2199 bp
Strand : +
Note : -

DNA sequence :
ATGATAACCAAAAAGCATACGCTCTGGGCCCTTAACCCGTTGTTGCTCGCCATGATGGCGCCAGCGGTCGCACAGCAGAG
CAGTGACGACACGTTAGTGGTTTCCGCCAACCGCACCAACCGTACGGTGGCGCAAATGGCGCAAACCACGTGGGTGATTG
AAAAAGCCGAACTGGAGCAGCAGATCCAGGGCGGTAAAGAGCTGAAAGACGCACTGGCTCAGTTGATCCCCGGTCTTGAC
GTCAGCAGCCAGAGCCGTACCAACTACGGGATGAACGTGCGTGGCCGTCCGCTGGTCGTGCTGGTGGACGGCGTGCGTCT
GAACTCGTCGCGCACCGACAGCCGCCAACTCGATTCCATCGACCCGTTCAATATCGACCACGTTGAAGTGATCTCCGGGG
CCACCGCGCTGTACGGTGGCGGTAGTACCGGCGGCCTTATCAATATTGTGACTAAAAAAGGCCAGCCGGATACCCAGATG
GAGTTTGAGACGGGGATCAAGAGCGGTTTCAACAGCAGTAAGGATCACGATGAGCGCGTTGCCAGCGCCATCTCCGGCGG
CAACGACCGTATCTCCGGGCGCGCATCGGTGGCGTACCAGAAGTTCGGCGGCTGGTTTGACGGTAACGGCGACGCGACTC
TGCTCGATAACACCCAGACTGGCCTACAGTATTCCGACCGTCTGGACGTGATGGGCACCGGGACGCTGAATATCGATGAT
ACCCAACAGCTTCAGTTGGTTACCCAATATTATAAAAGCCAGGGTGACGACGATTACGGGCTGAACCTCGGGAAAGATTT
TTCGGCAATCAGCGGCGCGACCAAGCCATACGTCAGTAGCGGCCTGCATTCAGACCGTATTCCGGGCACCGAGCGTCATC
TCATCAGCCTGCAATACTCGAATAGCGATTTCCTCGGTCAGGAACTGGTCGGCCAGGTCTATTACCGCGATGAATCGCTG
CTGTTTTATCCGTTCCCGACCGTCAACGCGAACAAACAGGCCACTGCGTTCTCCTCATCGCAGCAGGACACGGACCAGTA
TGGCGCGAAGCTGACCCTCAACAGCGAACCGCTGGACGGCTGGCAGTTGACCTACGGGCTGGATGCGGATCACGAGCGCT
TTACCTCTAACCAGATGTTCTTCGATCTGGCCCAGGCAAACGCTTCCGGCGGGATGGACAACAAGCGGATTTACACCACC
GGACGCTATCCGGGGTATGACATCACTAACCTGGCGACCTTCCTGCAATCCAGCTATGACATCAATGATATCTTTACCCT
GAGCGGCGGTGTGCGCTATCAGTACACCGAGAACAAGATTGATGATTTCATTGGCTACGCGCAGCAACAGCAGATTGCCG
CCGGGAGGGCGCAGTCCGCCGATGCGATCCCGGGCGGGTCGGTCGATTACGACAACTTCTTGTTTAACGCCGGTCTGCTG
GTTCATCTGACCGAACGCCAGCAGGCGTGGTTCAATTTCTCCCAGGGCGTGGAGCTGCCGGATCCGGGTAAATACTACGG
GCGCGGCACCTATGGCGCAGCGGTGAACGGGCACCTTCCGCTGACCAACAGCGTGAACGTGAACGACAGCGAACTGGAAG
GCGTGAAGGTCGACTCCTACGAGCTGGGCTGGCGCTTCTCCGGCGATAACCTGCGTACGCAAATCGCGGCCTACTACTCG
ATTTCCGATAAGAACGTGAAGGCAAATAAAGACCTGACCATCAGCGTGGTCGATGACAAGCGCCGCATCTACGGCGTGGA
AGGCGCGGTGGACTACTTTATCCCGGACACCGACTGGAGCACCGGTGCGAACTTCAACGTGCTGAAAACCGAGTCTAAAG
TGAACGGTAGCTGGGAAAAGTATGATGTGAAGGTGGCGAGCCCGTCGAAAGCAACGGCCTACATCGGCTGGGCACCGGAT
CCGTGGAGCCTGCGCGTACAGAGCACCACTTCCTTCGACGCCAGCGACGCTCAGGGCTACAAAATCGATGGTTACACCAC
GGTTGATCTGCTCGGTAGCTATGATCTGCCGGTGGGTAAACTCAGCTTCAGCGTGGAGAACGTTTTCGATCGCGACTACA
CCACCGTCTGGGGCCAGCGCGCGCCGCTGTACTACAGCCCGGGCTACGGTCCTGCGTCGCTGTACAACTACAAAGGGCGT
GGCCGCACCTTTGGCTTGAACTACTCACTGCTGTTCTAA

Protein sequence :
MITKKHTLWALNPLLLAMMAPAVAQQSSDDTLVVSANRTNRTVAQMAQTTWVIEKAELEQQIQGGKELKDALAQLIPGLD
VSSQSRTNYGMNVRGRPLVVLVDGVRLNSSRTDSRQLDSIDPFNIDHVEVISGATALYGGGSTGGLINIVTKKGQPDTQM
EFETGIKSGFNSSKDHDERVASAISGGNDRISGRASVAYQKFGGWFDGNGDATLLDNTQTGLQYSDRLDVMGTGTLNIDD
TQQLQLVTQYYKSQGDDDYGLNLGKDFSAISGATKPYVSSGLHSDRIPGTERHLISLQYSNSDFLGQELVGQVYYRDESL
LFYPFPTVNANKQATAFSSSQQDTDQYGAKLTLNSEPLDGWQLTYGLDADHERFTSNQMFFDLAQANASGGMDNKRIYTT
GRYPGYDITNLATFLQSSYDINDIFTLSGGVRYQYTENKIDDFIGYAQQQQIAAGRAQSADAIPGGSVDYDNFLFNAGLL
VHLTERQQAWFNFSQGVELPDPGKYYGRGTYGAAVNGHLPLTNSVNVNDSELEGVKVDSYELGWRFSGDNLRTQIAAYYS
ISDKNVKANKDLTISVVDDKRRIYGVEGAVDYFIPDTDWSTGANFNVLKTESKVNGSWEKYDVKVASPSKATAYIGWAPD
PWSLRVQSTTSFDASDAQGYKIDGYTTVDLLGSYDLPVGKLSFSVENVFDRDYTTVWGQRAPLYYSPGYGPASLYNYKGR
GRTFGLNYSLLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 86
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 86
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 86
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 86
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_0842 YP_006281832.1 Ferric aerobactin receptor VFG0619 Protein 0.0 86
W5S_0842 YP_006281832.1 Ferric aerobactin receptor VFG1085 Protein 0.0 86
W5S_0842 YP_006281832.1 Ferric aerobactin receptor VFG0936 Protein 0.0 86