Gene Information

Name : W5S_0840 (W5S_0840)
Accession : YP_006281830.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Aerobactin siderophore biosynthesis protein IucC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 927054 - 928787 bp
Length : 1734 bp
Strand : +
Note : -

DNA sequence :
ATGAACCGTATGGACTGGGAAATTGTTAACCGCCAGTTGGTGGCGAAAATGCTGGCTGAACTGGAATACGAACAGGTCTT
TCACGCCGAGTCTCTGGGCGATGACCGTTACGCGATTAATCTGCCGGGCGCGGAGTGGCACTTCAGCGCACAGCGCGGGA
TCTGGGGCTGGCTGTGGATCGACCATGAAACGCTGCGCTGCGCCGATGAGCCCGTTGTTGCACAGACGCTGCTGATGCAG
CTAAAGCCGGTGCTGTCGATGAGCGATGCCACCGTCGCCGAGCATATGCAGGATCTCTACGCTACGCTGCTGGGCGACCT
GCAACTGCGCAACGCACGTCGCGGCATGAGCGCGGAAGATCTTATCGCGCTGGACGCCGATCGGTTGCAGTGCCTGCTCA
GTGGTCATCCAAAATTCGCCTTTAATAAGGGCCGCCGTGGCTGGGGACGGGACGCGCTGACGCGCTATGCCCCGGAGTAC
GCCAATACCTTCCAGCTTCATTGGCTGGCGGTGAAACGCGACAACATGGTCTGGCGCTGCGACAGCGCGCTGGACGGCGA
ACAACTGCTGACGGCGGCGATGGACCCGCAGGAGCTGGCCCGTTTCCATCAGGCCTGGCAGGCGCGCGGGCTGGACAAGA
GCTGGCTCGCGTTGCCGGTGCATCCGTGGCAGTGGCAGCAAAAAATCGCCCTCGATTTCGTTGCCGATCTGGCTGAGGGC
CGCATGGTGTCGTTGGGTGAATTTGGCGACCGCTGGCTCGCCCAGCAGTCGCTGCGCACCCTGACCAACGCCAGCCGCCA
GGTCGGGCTGGATATCAAACTGCCGCTGACGATTTACAACACCTCCTGCTATCGCGGCATTCCGGGCAAATATATTGCCG
CCGGGCCGCTGGCCTCGCGCTGGCTTCAGCAGGTGTTTGCCACTGACCCGACGCTGCAACAAAGCGGCGCGGTGATCCTC
GGCGAACCGGCGGCGGGCTACGTTTCCCACGAGGGCTACGCCGCGCTGGCGCAGGCACCGTATCGTTATCAGGAGATGCT
CGGCGTTATCTGGCGCGAGAATCCGTTCCGCTGGCTGAAGTCCGATGAAATCCCAATTCTGATGGCGACCCTGATGGAGT
GCGATGAGCACAACCGGCCGCTGATTGGCGCGTATATCGCCCAGTCCGGGATGGATGCGGAAGCCTGGCTGTCGCAGATG
TTCCGCGTGGTGGTGGTGCCGCTCTACCACCTGCTGTGCCGCTACGGCGTCGCGCTGATCGCCCACGGACAAAATATTAC
CCTCGCCATGAAAAATGGCGTGCCGCAGCGCGTTCTGTTGAAGGATTTTCAGGGCGACATGCGGCTGGTGAAGGATGAGT
TCCCGGAGATGGACTCCCTGCCTCAGGAAGTGCGGGATGTTACCGCCCGCCTGAGCGCCGACTATCTGATTCATGATTTG
CAGACCGGCCACTTTGTGACGGTGTTGCGCTTTGTTTCGCCGCTTATGGTACGCCTCGGCGTGCCGGAGAGACGTTTTTA
TCAACTGCTGGCGACAGTGTTGAGTGATTACATGCAGGAACACCCACAACTGTCAGCGCGTTTCGCGCTTTTCTCACTCT
TCAGGCCACAAATCATTCGCGTCGTGCTGAACCCGGTAAAACTGACCTTCCCTGACCAGGACGGCGGCAGCCGCATGCTG
CCGAATTACCTCGAGGATCTGCAAAACCCGCTGTGGCTGGCGACAAAGGATTAA

Protein sequence :
MNRMDWEIVNRQLVAKMLAELEYEQVFHAESLGDDRYAINLPGAEWHFSAQRGIWGWLWIDHETLRCADEPVVAQTLLMQ
LKPVLSMSDATVAEHMQDLYATLLGDLQLRNARRGMSAEDLIALDADRLQCLLSGHPKFAFNKGRRGWGRDALTRYAPEY
ANTFQLHWLAVKRDNMVWRCDSALDGEQLLTAAMDPQELARFHQAWQARGLDKSWLALPVHPWQWQQKIALDFVADLAEG
RMVSLGEFGDRWLAQQSLRTLTNASRQVGLDIKLPLTIYNTSCYRGIPGKYIAAGPLASRWLQQVFATDPTLQQSGAVIL
GEPAAGYVSHEGYAALAQAPYRYQEMLGVIWRENPFRWLKSDEIPILMATLMECDEHNRPLIGAYIAQSGMDAEAWLSQM
FRVVVVPLYHLLCRYGVALIAHGQNITLAMKNGVPQRVLLKDFQGDMRLVKDEFPEMDSLPQEVRDVTARLSADYLIHDL
QTGHFVTVLRFVSPLMVRLGVPERRFYQLLATVLSDYMQEHPQLSARFALFSLFRPQIIRVVLNPVKLTFPDQDGGSRML
PNYLEDLQNPLWLATKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 86
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 86
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 86
iucC AAD44748.1 IucC Virulence SHI-2 Protein 0.0 85
iucC AAK71633.1 IucC Virulence SHI-3 Protein 0.0 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_0840 YP_006281830.1 Aerobactin siderophore biosynthesis protein IucC VFG0938 Protein 0.0 86
W5S_0840 YP_006281830.1 Aerobactin siderophore biosynthesis protein IucC VFG0617 Protein 0.0 86
W5S_0840 YP_006281830.1 Aerobactin siderophore biosynthesis protein IucC VFG1083 Protein 0.0 85