Gene Information

Name : W5S_0839 (W5S_0839)
Accession : YP_006281829.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Aerobactin siderophore biosynthesis protein IucB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 926107 - 927054 bp
Length : 948 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTATGGCCAATATCGTTCACAGCGGCCACGGCCTGCGCTGTGAAAAACTCGACGCACAACTGACTCTCGGCTGGGG
CCAGGATAACAGCGCGGTGCTGCGCTGGCCGGGTCCGCTGCCGGAAGGCTGGCTGCGCGATGCACTGGACCAGATTTTCA
TCGCCGCGCCGCAGATCTCCGCGCTGATTTTGCCTTACGCCGACTGGCGCGAGGAGCCGCAGGCGCTGGCGCTTTTTGCG
CAGATGCACAGCGATATTATTCATCGCGCCGTGTTCTGGCAGCTCCCGCTCTGGCTGAGCGCGCCGTCAAAACAGGCCTC
CGGCGAAATGACCTTTGACGCAGAACGTGAAATCTACTTCCCTGCTCGCCCGGCGCGCCCAGAGGGTGAGGTTTATCGTC
GTTACGATCCACGCGTGCGTAAAACCCTGAGTTTCCGCGTGGCAGACCCGGCGCTGGACGCCGAACGTTTTACCCGCTGG
ATGAACGATCCGCGTGTGGAATATTTCTGGGAGCAAGGCGGTTCCCTTGCGCTACAAACCGCCTATCTCGAACGCCAGCT
CACCGGAAAACATGCGTTCCCGTTGATTGGCTGTTTTGACGATCAGCCGTTCAGCTACTTTGAAATTTACTGGGCAGCGG
AAGATCGTATCGGCCGCCACTATACCTGGCAGCCCTACGATCGCGGTCTGCACCTACTGGTCGGCGAACAGGCCTGGCGA
GGCGCGCACTACGTTCAAAGCTGGCTGCGCGGGCTGACGCACTATTTGCTGCTGGATGAACCGCGCACGCAGCGCACGGT
GCTGGAGCCGCGCGCCGACAACCAGCGCCTGTTCCGCCACTTCGATCCGGCGGGCTACCGCACGCTGAAAGAGTTCGACT
TCCCGCATAAACGTTCGCGCCTGGTGATGGCAGATCGCACCCGCTTCTTTATGGAGGTGGGCCTGTGA

Protein sequence : 
MSMANIVHSGHGLRCEKLDAQLTLGWGQDNSAVLRWPGPLPEGWLRDALDQIFIAAPQISALILPYADWREEPQALALFA
QMHSDIIHRAVFWQLPLWLSAPSKQASGEMTFDAEREIYFPARPARPEGEVYRRYDPRVRKTLSFRVADPALDAERFTRW
MNDPRVEYFWEQGGSLALQTAYLERQLTGKHAFPLIGCFDDQPFSYFEIYWAAEDRIGRHYTWQPYDRGLHLLVGEQAWR
GAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRADNQRLFRHFDPAGYRTLKEFDFPHKRSRLVMADRTRFFMEVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 3e-127 84
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 3e-127 84
iucB AAK71632.1 IucB Virulence SHI-3 Protein 2e-127 84
iucB AAD44747.1 IucB Virulence SHI-2 Protein 3e-127 83
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 2e-126 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_0839 YP_006281829.1 Aerobactin siderophore biosynthesis protein IucB VFG0616 Protein 1e-127 84
W5S_0839 YP_006281829.1 Aerobactin siderophore biosynthesis protein IucB VFG1082 Protein 1e-127 84
W5S_0839 YP_006281829.1 Aerobactin siderophore biosynthesis protein IucB VFG0939 Protein 7e-127 83