Gene Information

Name : W5S_0838 (W5S_0838)
Accession : YP_006281828.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Petrobactin biosynthesis protein AsbA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 924382 - 926106 bp
Length : 1725 bp
Strand : +
Note : -

DNA sequence :
ATGACTTTGCCAAAGAAAACTCCGACCTGGGATGTCGCTGCGCAGTGCTTCCTGAACGCGCTTATTCGTGAAACCAGAAC
GTGGCGACTGACCGAAAGCCAGCCTGCTGAACTGATTATCCCCCTCGACGATCGTCAGGCGCTGCATTTCACGGTGGACT
ACTTCTCACCGACTCAGCATCACCGTTTCGCCTTCCCGGCTCAGTTAGTGAGCGCTTCGGATCGCGAGCCTGTCGATTTC
CCGACATTTTCCCGTCTCATTGTTGATACGCTCCGGCATACGCTGTCGCTGCCCGCGTCTCACGCCGATGCGTTTTACCA
GCGCGTCACCCAAAGCCATACGCATACGCAGCAGGCCATCGACGCTCGTCACGACTGGGCCACCCTGCGCGAGCACGCGC
TGAACTTTGGCGAAGCGGAACAAGCGCTGCTGGTGGGCCACGCGTTCCATCCGGCACCAAAATCGCATGAACCCTTTACC
CGACAGGAGGCGGAGCGCTATCTGCCGGACTTCGCTCCCCACTTCTCGCTGCGCTGGTTTTCGGTTGATAAAGCGCACAT
AGCGGGCGACAGCCTGCATCTGAATCTGCAACAGCGCCTGACGCGCTTTGCCGCCGAAAACGCCCCACAGTTGCTCAGTG
AACTGAGCAATAGCCAGTGGCTTTTCCCGCTGCATCCGTGGCAGGCCGCATATCTGCTGGAACAGCCATGGTGCCAGCAG
TTGGCGGAGCAGGGGCTACTGCGGGATCTGGGCGAAGCCGGTACGCCGTGGCTGCCGACCACCTCTTCCCGTTCGCTTTA
CTGCGCCACCAGCCGCGACATGATCAAGTTTTCGCTCAGCGTGCGCCTGACCAACTCCGTGCGCACCCTGTCGGTGAAAG
AAGTGACGCGCGGCATGCGCCTGGCGCGTCTGGCGCAAACGGAACGCTGGCAGATGCTGCAAACCCGTTTCCCGACGTTC
CAGGTGATGCAGGAGGACGGCTGGGGGGGGCTGCGCGATCTGCACGGCAATATCATGGCGGAAAGCCTGTTTGCCCTGCG
TGAAAACCTGCTGGTCGATCGGCCACAAAGCCAGACCAACGTACTGGTGTCTCTGACGCAGGCCGCACCGGATGGCGGCG
ATTCGCTGCTGGTCGCGGCAGTCAAACGCCTGAGCGCACGTCTGGGGATCACGCCGCAGCAGGCCGCCCACACGTGGGTT
GACGCCTACTGCCAGCAGGTACTGAAACCGCTGTTCACCGCCGAAGCGGATTACGGCCTGGTCCTGCTGGCGCATCAGCA
AAATATTCTGGTGGAGATGCAGCAGGATCTCCCCATCGGGCTTATCTATCGCGACTGCCAGGGCAGCGCGTTTATGCCAC
ATGCGGCGGGCTGGCTCGACGTTATCGGCGAGGCGCAGGCTGAAAATATTTTCACCCACGAGCAATTGCTGCGCTACTTC
CCGTACTACCTGCTGGTGAACTCCACCTTCGCCGTCACCGCCGCGCTGGGCGCTGCCGGGCTGGACAGCGAAGTTAGCCT
GATGGCGCGGGTACGCATGCAGCTTTGCGCGGTGCGCGAACAGGTGACGCACAAGACCTGTCTCGACTACGTGCTGGAAA
GCCCATTCTGGAACGTGAAAGGCAACTTCTTCTGTTACCTGAACGATCACAACGAAAACACCATCGTCGACCCATCGGTC
ATCTATTTCGATTTCGCCAACCCGCTGCTGGCGCAGGAGTCCTGA

Protein sequence :
MTLPKKTPTWDVAAQCFLNALIRETRTWRLTESQPAELIIPLDDRQALHFTVDYFSPTQHHRFAFPAQLVSASDREPVDF
PTFSRLIVDTLRHTLSLPASHADAFYQRVTQSHTHTQQAIDARHDWATLREHALNFGEAEQALLVGHAFHPAPKSHEPFT
RQEAERYLPDFAPHFSLRWFSVDKAHIAGDSLHLNLQQRLTRFAAENAPQLLSELSNSQWLFPLHPWQAAYLLEQPWCQQ
LAEQGLLRDLGEAGTPWLPTTSSRSLYCATSRDMIKFSLSVRLTNSVRTLSVKEVTRGMRLARLAQTERWQMLQTRFPTF
QVMQEDGWGGLRDLHGNIMAESLFALRENLLVDRPQSQTNVLVSLTQAAPDGGDSLLVAAVKRLSARLGITPQQAAHTWV
DAYCQQVLKPLFTAEADYGLVLLAHQQNILVEMQQDLPIGLIYRDCQGSAFMPHAAGWLDVIGEAQAENIFTHEQLLRYF
PYYLLVNSTFAVTAALGAAGLDSEVSLMARVRMQLCAVREQVTHKTCLDYVLESPFWNVKGNFFCYLNDHNENTIVDPSV
IYFDFANPLLAQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucA NP_839223.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 84
iucA NP_709454.2 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 84
iucA AAD44746.1 IucA Virulence SHI-2 Protein 0.0 84
iucA YP_002414046.1 aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 84
iucA AAK71631.1 IucA Virulence SHI-3 Protein 0.0 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_0838 YP_006281828.1 Petrobactin biosynthesis protein AsbA VFG0615 Protein 0.0 84
W5S_0838 YP_006281828.1 Petrobactin biosynthesis protein AsbA VFG0940 Protein 0.0 84
W5S_0838 YP_006281828.1 Petrobactin biosynthesis protein AsbA VFG1081 Protein 0.0 78