Gene Information

Name : W5S_0768 (W5S_0768)
Accession : YP_006281759.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 836415 - 837314 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence :
ATGCAAGAACACGATCAGGCACTTATCGAACAGTTTCTCGACGCGCTGTGGCTGGAACGAAATCTGGCTGAGAATACATT
GGCGTCTTATCGCTTGGATCTGCGAACGCTCGCGGAGTGGCTTGCACATCATGACAACGATTTATTGCAGGCACAGTCGC
TCGATCTTCAGGCGTTTCTTGCTGATAGGGTCGACGGCGGCTACAAGGCGACGAGCTCCGCCCGTTTGCTGAGTGCGATG
CGTCGCTTCTTTCAGTACCTTTATCGCGAAAAGCTACGTAGCGACGATCCGAGTGCGGTGCTGTCGTCTCCGAAACTGCC
GCAGCGTCTACCTAAAGATTTGAGCGAAGCTCAGGTGGGGGCGTTACTCGATGCCCCGAGCATTGAACAACCGCTGGAAT
TACGCGATAAAGCCATGCTTGAGGTATTGTATGCGACGGGGCTACGTGTTTCCGAACTGGTTGGCTTGACGATGAGCGAT
GTCAGTCTGCGGCAAGGTGTGGTGCGCGTGCTGGGTAAAGGCAATAAAGAACGGCTGGTGCCGCTGGGTGAAGAAGCGGT
GTATTGGATCGAGTATTATCTGGAACATGGTCGTCCGTGGTTGCTGAATGGGCAGACGCTGGATGTGCTATTTCCCAGCA
ATCGCGCTCGACAAATGACGCGCCAGACGTTCTGGCATCGCATCAAACATTATGCGGTGCAGGCGTCGATCGACAGTGAA
AAGCTCTCGCCGCACGTTTTACGTCACGCGTTTGCGACCCATTTATTGAACCACGGCGCGGATTTACGAGTCGTACAGAT
GCTCTTAGGGCACAGCGATCTTTCCACGACGCAGATATACACGCATGTGGCGACGGAGCGGCTGAAGCAGCTTCACCAGC
AGCACCATCCGCGCGCCTAG

Protein sequence :
MQEHDQALIEQFLDALWLERNLAENTLASYRLDLRTLAEWLAHHDNDLLQAQSLDLQAFLADRVDGGYKATSSARLLSAM
RRFFQYLYREKLRSDDPSAVLSSPKLPQRLPKDLSEAQVGALLDAPSIEQPLELRDKAMLEVLYATGLRVSELVGLTMSD
VSLRQGVVRVLGKGNKERLVPLGEEAVYWIEYYLEHGRPWLLNGQTLDVLFPSNRARQMTRQTFWHRIKHYAVQASIDSE
KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-62 62
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-62 62