Gene Information

Name : W5S_0619 (W5S_0619)
Accession : YP_006281616.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : HTH-type transcriptional regulator yjdC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 677050 - 677625 bp
Length : 576 bp
Strand : -
Note : -

DNA sequence :
ATGCAACGGGAAGATGTTCTTGAACATGCGCTTACTCTACTGGAGCAGCACGGATTTGCCACAACAACACTGGATATGCT
GGCGGAGAAACTGGGGGTTCCTGTAGAGGAACTGACGCCATTCTGGCCGGATCGGGAGGCGCTGCTGTACGACGGCCTGC
GCCATCACAGCCAACAGGTCGATACCTGGCGGCGTCAGTTGCTATTAGACGACGAGAAAAGCATCGAGCAGAAGCTGCTG
GCGCGCTATCAGGTACTGCATGAGTCGGTGAACAAACAGCGTTATCCTGGCTGCTTGTTTATCGCCGCGTGCAGCTTCTT
CCCTGATATCAATCACCCTATCCACCAAATTGCAGAACAGCAGAAGCAGGCTTCTTACCGCTACACCCGCGATTTGCTGG
AAGAGCTGGAAACCGACGATCCCGAGATGGTAGCACAACAGATGGAACTGATTCTGGAAGGCTGCCTAAGCAACCTGCTG
GTCAAGCATCAGGCCGCCAGCATCGCCACCGCCCAACGGCTGGCAGAAGATGTATTACGCTTCGCGCTGTGCCGCAAGGG
TGGGGCGTTGACCTAA

Protein sequence :
MQREDVLEHALTLLEQHGFATTTLDMLAEKLGVPVEELTPFWPDREALLYDGLRHHSQQVDTWRRQLLLDDEKSIEQKLL
ARYQVLHESVNKQRYPGCLFIAACSFFPDINHPIHQIAEQQKQASYRYTRDLLEELETDDPEMVAQQMELILEGCLSNLL
VKHQAASIATAQRLAEDVLRFALCRKGGALT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0341 CAF28570.1 putative transcription regulator Not tested YAPI Protein 5e-57 70