Gene Information

Name : W5S_4784 (W5S_4784)
Accession : YP_006285696.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Glutamate synthase (NADPH), small subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5141136 - 5143160 bp
Length : 2025 bp
Strand : -
Note : -

DNA sequence :
ATGAACCGATTTGTTATTGCCAGTACTCAAGACTGTATGGGATGTCATGCATGTGAAATCGCCTGTGTGATTTCACACAA
TGACGAGCGCTATCCAGATAGCACCACGGTATTTCAGCCCAGAATCAAGGCATTCAATACGCCAAAACTGCGGGCCGCCG
TGACATGCCGCCACTGTGAAGATGCCCCCTGTGCAGGCGTATGCCCAACACAGGCCTTGATCAGAAAAGACAATAGCATT
CAGCTCGTTCAGGAAAAGTGCATCGGCTGCAAAAGCTGTGTACTGGCTTGCCCGTTCGGCGCGATGTCGATGGTGACAAA
CCCGATGAACAACAGCACCATCGCGCATAAATGCGATCTCTGCGCCGACCGCCCAGAAGGGCAAGCGTGTGTGGAAGCTT
GCCCAACGCAGGCATTGCAGTTAGTCAGTGAACAAACGTTAGCAACCCGCCGCCAAGAGAAACAGCAGGTGATGGCACAA
CGTTCCGCCGCACACTGGCAGCGTGAAACGCCCGTGGTGAAAACACTGACGCTCAATCCACTCAGTAAAAGGAAAAACTG
GCCGCGCCGGGATGCGGAGAAAAAACCGCTGGCGCAGAGAACCACCACGTTTGATGAAATCTATCATGGCTTCTCCGTAC
AGCAGACGGAAGATCAGGCTGACCGCTGTCTTTCCTGCGGTAAACGCGCCATCTGCGAATGGACCTGCCCGCTGCATAAC
AATATTCCCGAATTGCTGAGTCTGGCAAAGCAAGGCCGCATTCTTGAAGCCGTAGAGCTCTCACACCAAACCAGCAGCCT
GCCGGAAATCTGCGGTCGGGTATGCCCGCAGGATCGGCTATGTGAAGGGGCCTGTACGCTGGGCAAAGAATATGGCGCGA
TTACCATCGGCAACGTCGAACGCTACATTACCGACACCGCGATGAAGATGGGCTGGTCACCCGATATGACGCATGTTGTT
CCCAGCGGAAAGCGCGCCGCGATCGTTGGGGCTGGCCCGGCAGGGTTAGCCTGTGCCGATGTGTTGGCACGTAATGGCGT
GCAGGCCGTCGTGTTCGATCGTCACCCGGAAATTGGTGGCCTGCTCACGTTCGGGATCCCGTCGTTCAAACTGGACAAAG
ACGTCCTGATCCATCGCCGTGAAGTGTTCAGCGCCATGGGAATCGACTTCCAGTTGAATACCGAAGTGGGGAAAGACATT
TCTCTGGCCCAGCTTCTGGACGACTATGACACTGTTTTCCTCGGCGTGGGCACCTACCGCTCCATGAAAGCCAACATTGA
TAATGAAAATGCTCCCGGCGTTTTTGATGCACTTCCCTTCTTGATCGCCAATACCAAACACGTCATGGGGTTACCTGAAT
TAGACGATGAGCCCTATATCTCGATGGCGGGCAAACGCGTCGTGGTGCTCGGCGGTGGAGATACTGCAATGGACTGCCTG
CGCACATCCGTTCGGCAAGGTGCGATATCCGTAACCTGCGCCTATCGCCGTGATGAAGCCAACATGCCCGGCTCGAAAAA
AGAGGTTAAAAACTCCCGCGAAGAAGGCGTGGAATTCATGTTTAACGTTCAGCCACAGAAAATCTGCCTCAATGAACAGG
GCGAGGTGTGCGGTATTAGTCTGGTTCGAACCGAGCTGGGCGAGCCTGATGCCAGCGGCCGTCGTCGTCCGCGCCCGATT
CCTGGTTCGGAATTCGTTCAGCCTGCAGAAGCCGTGATAACCGCATTTGGTTTTCAATCACACAGTATGCCGTGGCTGGA
AGAGGCTGACGTCGATCTGGATAATTGGAGATACATCACTGCCCCGCTCGATAGTCAGATACCTTGCCAAACCAATCATC
CGCGTATTTTTGCGGGTGGTGATGCCGTGCGCGGTGCCGATCTGGTGGTTACCGCTATTGCTGATGGGCGGAAAGCCGCA
TTGGGAATGATTGCAACGATGGGGCTGACCGCCGTCACGGGTGCTCTTCCCGCACACCCGCAGCGCCACGAGATAAACGC
AGTACGCGAGGAGGTCCGCACATGA

Protein sequence :
MNRFVIASTQDCMGCHACEIACVISHNDERYPDSTTVFQPRIKAFNTPKLRAAVTCRHCEDAPCAGVCPTQALIRKDNSI
QLVQEKCIGCKSCVLACPFGAMSMVTNPMNNSTIAHKCDLCADRPEGQACVEACPTQALQLVSEQTLATRRQEKQQVMAQ
RSAAHWQRETPVVKTLTLNPLSKRKNWPRRDAEKKPLAQRTTTFDEIYHGFSVQQTEDQADRCLSCGKRAICEWTCPLHN
NIPELLSLAKQGRILEAVELSHQTSSLPEICGRVCPQDRLCEGACTLGKEYGAITIGNVERYITDTAMKMGWSPDMTHVV
PSGKRAAIVGAGPAGLACADVLARNGVQAVVFDRHPEIGGLLTFGIPSFKLDKDVLIHRREVFSAMGIDFQLNTEVGKDI
SLAQLLDDYDTVFLGVGTYRSMKANIDNENAPGVFDALPFLIANTKHVMGLPELDDEPYISMAGKRVVVLGGGDTAMDCL
RTSVRQGAISVTCAYRRDEANMPGSKKEVKNSREEGVEFMFNVQPQKICLNEQGEVCGISLVRTELGEPDASGRRRPRPI
PGSEFVQPAEAVITAFGFQSHSMPWLEEADVDLDNWRYITAPLDSQIPCQTNHPRIFAGGDAVRGADLVVTAIADGRKAA
LGMIATMGLTAVTGALPAHPQRHEINAVREEVRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YP0342 CAF28571.1 putative oxidoreductase Not tested YAPI Protein 0.0 58