Gene Information

Name : W5S_4717 (W5S_4717)
Accession : YP_006285629.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5072235 - 5072897 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAATATTGTTAATCGAAGACGATCGCCTGATCGGTGATGGCCTAAAAGCTGGGTTGACCAAACTGGGCTTTACTAT
TGACTGGTTTACGGAAGGTAAAGCGGGTGCCGCCGCATTGAAGGCCGCACCTTATGATGCTGTGGTGCTCGATCTCAGCC
TGCCGGGTATGGATGGGATGGATATCCTACGCCAGTGGCGTCAGGCTGGACATGACGAACCGGTACTGATTCTGACCGCC
CGTGATGCGCTGGAACAGCGCGTGGAAGGGTTGCAACAGGGTGCCGATGATTATTTATGTAAGCCCTTTGCACTGACGGA
AGTTGCCGCTCGTCTACAGGCACTGATTCGCCGCCGTCACGGCCAGCTCCAACCTGAATTAACGCACGGTTCGGTTTCCC
TTGAACCGGGCTCGCGGAGCGTCACGCTTAACTGCGAGCCGTTGATACTAAAATCCCGCGAACTGGCGCTGCTGGAACTG
TTTTTGCTCAATCCAAACCGTGTGCTCACCCGTGCGCAGTTAGAAGAAAAGCTCTATGGGTGGGACGATGATGTCTCCAG
CAATGCGGTCGAAGTGCATATCCACCACCTGCGAAAAAAGCTGGGCAGCGGGTTTATCCGTACCGTGCATGGCATTGGCT
ATATTCTGGGAGATGCACCATGA

Protein sequence : 
MRILLIEDDRLIGDGLKAGLTKLGFTIDWFTEGKAGAAALKAAPYDAVVLDLSLPGMDGMDILRQWRQAGHDEPVLILTA
RDALEQRVEGLQQGADDYLCKPFALTEVAARLQALIRRRHGQLQPELTHGSVSLEPGSRSVTLNCEPLILKSRELALLEL
FLLNPNRVLTRAQLEEKLYGWDDDVSSNAVEVHIHHLRKKLGSGFIRTVHGIGYILGDAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-35 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_4717 YP_006285629.1 Transcriptional regulatory protein QseB BAC0487 Protein 1e-33 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_4717 YP_006285629.1 Transcriptional regulatory protein QseB VFG0473 Protein 6e-31 43