Gene Information

Name : W5S_4678 (W5S_4678)
Accession : YP_006285595.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5031835 - 5033949 bp
Length : 2115 bp
Strand : +
Note : -

DNA sequence :
ATGGTGGGCCGCGATGCAATCATCGGAGTGCTGATGAAAGGCCGCCTGCTAAACACCCAACCGCTGAGCACTCTCGCTGG
CGTGGGTGCCAGTCAGGCAGCTAAGCTCGCACGACTCGGGCTGGAAACCGTGCAGGATCTCCTGTTGCACCTCCCCCTGC
GCTACGAAGACCGCACACACCTTTACCCGATTGGCGATCTCCTGCCCGGTATGTATGCCACCGTGGAAGGTGAAATCCTA
CGCAACGACATCACCTTTGGCAGCCGTCGTATGTTGACCTGCCAAATCAGCGACGGCAGCGGCATGTTGACCATGCGCTT
CTTCAATTTCAGCGCAGCGATGAAAAACAGCCTCGCGCCGGGACAGCGTGTCACCGCTTATGGCGAAATCAAGCGCGGCA
AAATCGGCGCGGAAATCATCCATCCTGAATACCGTGTTCAAGGGGATAGTACGCAGGTTGAGCTACAGGAATCGCTCACA
CCGGTTTATCCCTCCACAGAGGGCATTCGCCAAGCAACCCTGCGCAAGCTCACCGATCAAGCGCTGGATCTGCTCGCTGC
AAATCACATCGATGAATTACTACCAGAATCCCTGAGCCGATCGCTCATTAGCCTGCCGGATGCGCTACGCACGTTACATC
GTCCCCCACCGGATATGCAGCTTACCGAGCTTGAACATGGGAAACACCCAGCGCAGCAGCGGCTGATTATGGAAGAACTG
CTGGCGCACAACCTAAGTATGCTCGCCGTGCGGGCAGGGGAACAGCGACATAAAGCGTCACCCCTACCGACGAAGGACAG
TCTGAAACAGCAACTGCTCGCAGCCCTACCGTTCACACCTACGCAGGCGCAAGATCGTGTCGTAGCTGAGATTGAAACGG
ATATGGCGAAAGATTTTCCGATGATGCGTCTGGTACAAGGCGATGTGGGGTCAGGGAAAACGCTGGTCGCCGCATTGGCC
GCATTACGTGCCATTGCCAGCGGCAAACAGGTCGCGCTGATGGCACCAACAGAGCTATTGGCCGAGCAGCATGCCCATAA
TTTCCGTCAGTGGTTCGAACCATTAGGGCTTGAAGTCGGCTGGCTGGCTGGCAAACAAAAAGGAAAAGCGCGTCAGGCAC
AGCAGGATGCCATCGCCAACGGTCAGGTTTCCATGGTTGTCGGGACACACGCTATTTTTCAGCAACAGGTGAAATTTAAC
GGGCTGGCATTAGTGATCATTGACGAACAGCATCGCTTTGGCGTTCATCAACGCCTGGCGCTGTGGGAAAAAGGCGAAGA
GCAGGGTTTTCATCCCCATCAATTGATTATGACCGCCACACCGATCCCCCGCACGCTGGCGATGACGGCCTATGCCGATC
TGGATACCTCTGTTATTGATGAGCTGCCACCAGGCAGAACCCCTGTCACCACCGTCGCTATACCGGACTCACGCCGTAGC
GACATCATCGAACGGGTGAATAGCGCCTGTCAGCAGGAAGGTCGGCAGGCTTACTGGGTCTGTACGCTGATTGAGGAATC
TGACCTCTTGGAAGCGCAGGCAGCAGAGGCTACCAGTGAAGAGCTAAAGGCTGCTTTGCCAAATCTTAAGGTTGGATTGG
TTCATGGCCGCATGAAAGCACAAGAAAAACAGGCAGTAATGCAGGCTTTCAAACAGGGTGAACTGCAACTGCTGGTGGCG
ACAACCGTTATCGAGGTGGGTGTCGATGTACCCAATGCCAGCCTGATGATCATTGAGAACCCGGAGCGTCTGGGTCTGGC
GCAACTGCACCAATTGCGCGGGCGCGTCGGGCGTGGAGCGGTGGCCTCTCACTGCGTACTACTCTATAAAACACCGATGA
GCAAAACCGCACAAAAACGGCTCCAGGTACTCCGCGACAGCAATGACGGCTTTGTCATTGCTCAGCGCGATCTGGAAATT
CGCGGGCCGGGCGAATTATTAGGTACGCGGCAAACGGGTAATGCCGAGTTCAAAGTAGCCGATCTCCTGCGCGATCGGGA
TTTGATTCCGCAGGTACACCGCGTTGCTCGCCATCTGCATGAGCACTATCCTGATCATGCCATCGCGCTAATCGAACGCT
GGCTACCCGAGCGAGCGCGCTACACCAACGCCTAA

Protein sequence :
MVGRDAIIGVLMKGRLLNTQPLSTLAGVGASQAAKLARLGLETVQDLLLHLPLRYEDRTHLYPIGDLLPGMYATVEGEIL
RNDITFGSRRMLTCQISDGSGMLTMRFFNFSAAMKNSLAPGQRVTAYGEIKRGKIGAEIIHPEYRVQGDSTQVELQESLT
PVYPSTEGIRQATLRKLTDQALDLLAANHIDELLPESLSRSLISLPDALRTLHRPPPDMQLTELEHGKHPAQQRLIMEEL
LAHNLSMLAVRAGEQRHKASPLPTKDSLKQQLLAALPFTPTQAQDRVVAEIETDMAKDFPMMRLVQGDVGSGKTLVAALA
ALRAIASGKQVALMAPTELLAEQHAHNFRQWFEPLGLEVGWLAGKQKGKARQAQQDAIANGQVSMVVGTHAIFQQQVKFN
GLALVIIDEQHRFGVHQRLALWEKGEEQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDSRRS
DIIERVNSACQQEGRQAYWVCTLIEESDLLEAQAAEATSEELKAALPNLKVGLVHGRMKAQEKQAVMQAFKQGELQLLVA
TTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPMSKTAQKRLQVLRDSNDGFVIAQRDLEI
RGPGELLGTRQTGNAEFKVADLLRDRDLIPQVHRVARHLHEHYPDHAIALIERWLPERARYTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-98 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_4678 YP_006285595.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 61