Gene Information

Name : W5S_0466 (W5S_0466)
Accession : YP_006281464.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Putative DNA-binding prophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 503745 - 504623 bp
Length : 879 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAAATTAAGTCGTGAAATGACCACGCTGGCGAAACAGGCTGGCGGGAGCTACAAGACGGTTCATGATCGTATCCG
CATCATGGACAAGCTGTGCCGCCACCTGCTGGCGCTGAATATTCAGGTGCGTGACGTTAAGTATCTCAAAGCCAGACATA
TCGAAAGTTATGTCGCCGAACGCCTGTCACAGCGGATTGCCCTTCGTACCCTGCACAACGAAATGGCAGCGTTGCGCACG
GTGTTTAAGCAGGGAGGACGGGAAAAGCTCGCCGCGTCCGACCGCCTGACCAATAACGCGCTGGGGCTGAGTGGGGCAAG
CCGTGCCGGGACAAAATTCGCCATTCCGGACGAACGCTATCAGGCCGTTCTGCTTGCAGCGCAACAGCGTGATAAAGGGT
TGGCCTGCGCACTTCAGCTTGCCCGGTTGCTGGGACTGCGTTCTCAGGAAGCGGTGCAATGCGCCAGTTCATTGAATACA
TGGGAAAAGCAGCTTGAGCGCCATCAACAGACGCTGACCGTGGTATTTGGCACGAAAGGCGGCAGGCCACGCGAAACCCG
GATTATCGATCGCGAAGCGATTCAACGGGCAGTAAAAGATGCACTAAAGGTGGCCGAAGCGCGTAATGGCAGGTTGATCG
ATAAACCCGACCTGAAAACCGCCATGAACTTCTGGCGCACGCAGACCACCCGCTTAGGGCTGACCGGCTACTACTCCCCA
CACAGCCTGCGCTACGCATGGGCGCAGGATGCCATGCGTTATTACCTGTCACAGGGCTTTTCCCGCAGTGAAGCCAGAGC
ATTAACCTCTATGGATCTCGGCCACGGTGATGGTCGGGGGCGCTATGTCGAGCGGGTTTACACCCGGAAGGAGGATTGA

Protein sequence :
MSKLSREMTTLAKQAGGSYKTVHDRIRIMDKLCRHLLALNIQVRDVKYLKARHIESYVAERLSQRIALRTLHNEMAALRT
VFKQGGREKLAASDRLTNNALGLSGASRAGTKFAIPDERYQAVLLAAQQRDKGLACALQLARLLGLRSQEAVQCASSLNT
WEKQLERHQQTLTVVFGTKGGRPRETRIIDREAIQRAVKDALKVAEARNGRLIDKPDLKTAMNFWRTQTTRLGLTGYYSP
HSLRYAWAQDAMRYYLSQGFSRSEARALTSMDLGHGDGRGRYVERVYTRKED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 3e-83 63
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 3e-83 63
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 1e-73 57
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 1e-73 57
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 3e-65 52
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 2e-73 51
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 7e-71 49
api85 CAF28559.1 putative integrase Not tested YAPI Protein 1e-46 47
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 1e-52 44
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 1e-52 44