Gene Information

Name : W5S_4342 (W5S_4342)
Accession : YP_006285270.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Resistance
Product : YckI (ABC transporter YckI)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4687276 - 4688037 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
ATGATCAGTGTAAAGAATCTTTCTAAACGCTTTGGCGATCAGGTGGTGTTGAACAACATTAGTCTGGATATCGCGAAAGG
CGAAGTTGTTGCCATCATCGGCCCATCCGGTTCAGGTAAATCCACGCTACTGCGCTGCCTAAATCTGCTGGAAACGCCAG
AGTCAGGCACGATTGAAATTGGCGAACAAATGCTGGATACGCATCGTTATTCCTCCAAGGAGGCCTACGCGCTGCGCCGT
CAAACGGCGATGGTATTCCAGAGCTATAACCTATTTAAGAACAAAACGGCGCTGGAGAATGTAACGGAAGCGCTGATTGT
CGTGAAAAAAATGCCGAAGAAGCAGGCGGATGAAATCGGTCTGGCGTTGCTGGAACAGGTTGGCCTGCTGCCGCAGGCGG
CGCAGTATCCGGTGACGTTATCCGGCGGGCAGCAGCAGCGTGTGAGTATTGCTCGTGCGCTGGCGGTCGATCCGAAAGCC
ATTTTGTTTGATGAACCGACCTCGGCGCTGGATCCAGAAAGGGTACACGAAGTGCTTCAGGTGATTCAGAAGCTGGCGAA
AAACGACACCACGATGGTGATCGTTACCCATGAAATGCAGTTTGCCAAAGAAGTGGCTGACCGCGTGATCTTCATGGCAG
ACGGTCACATCGTTGAGGAAGGCCCGGCAGAACAGGTGATCAGCTTCTCAGATAACCCACAAACCCAGCGTTTCCTGCGT
CAGTTGACCAAGCTGCCTGAGCCGCTTGAGTACGATATTTAA

Protein sequence :
MISVKNLSKRFGDQVVLNNISLDIAKGEVVAIIGPSGSGKSTLLRCLNLLETPESGTIEIGEQMLDTHRYSSKEAYALRR
QTAMVFQSYNLFKNKTALENVTEALIVVKKMPKKQADEIGLALLEQVGLLPQAAQYPVTLSGGQQQRVSIARALAVDPKA
ILFDEPTSALDPERVHEVLQVIQKLAKNDTTMVIVTHEMQFAKEVADRVIFMADGHIVEEGPAEQVISFSDNPQTQRFLR
QLTKLPEPLEYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_4342 YP_006285270.1 YckI (ABC transporter YckI) NC_012469.1.7685735. Protein 2e-24 41