Gene Information

Name : W5S_4173 (W5S_4173)
Accession : YP_006285101.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4495455 - 4496123 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATTATTGATTGTTGAAGACGATAAGCTGCTGCAAGAAGGATTATTATTGGCGCTGAGTCATGAAGGCTATGCCTG
CGATTGCGCAGGCACGGCCAAAGAAGCGGATGCGCTCATCGGCAGCGCACACTACAGTCTGGTGATCCTCGATCTTGGCT
TGCCGGACGACGACGGCCTCGCCCTACTATCCCGATGGCGTAAGAACAATTATCAGCATCCCGTGCTCATCTTAACGGCG
CGGGATAAGGTCGACGATCGCGTCAGCGGATTGGATGTTGGCGCAGACGATTATCTCGCCAAGCCTTTTGCACTGACGGA
ATTACAGGCGCGAGTACGCGCGCTAATTCGCCGCAATCAGGGGTCGAGCAACAGCAAGATACAGGTCGACAACATTACGT
TGGATTTAAACAACCAACAGGTGCTGCTGGACGAAAAGCCGGTAGTGCTGACGCCAAAAGAGTTTGCGATACTTTCCCGC
CTGGTGTTGAAAGCCGGTTATCAGGTACACCGAGAACTTCTACATCAGGATATTTATGCCTGGAACGACGACCCGTCCTC
GAATTCGCTTGAGGTACATATCCACAATCTGCGTCAAAAGATAGGGAAAGACCGGATCCGAACTCTGAGAGGATTTGGCT
ACCTGCTGACCAAAGGGGAACAACCATGA

Protein sequence : 
MKLLIVEDDKLLQEGLLLALSHEGYACDCAGTAKEADALIGSAHYSLVILDLGLPDDDGLALLSRWRKNNYQHPVLILTA
RDKVDDRVSGLDVGADDYLAKPFALTELQARVRALIRRNQGSSNSKIQVDNITLDLNNQQVLLDEKPVVLTPKEFAILSR
LVLKAGYQVHRELLHQDIYAWNDDPSSNSLEVHIHNLRQKIGKDRIRTLRGFGYLLTKGEQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_4173 YP_006285101.1 Transcriptional regulatory protein QseB BAC0487 Protein 9e-86 100
W5S_4173 YP_006285101.1 Transcriptional regulatory protein QseB NC_002516.2.879194.p Protein 3e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_4173 YP_006285101.1 Transcriptional regulatory protein QseB VFG0473 Protein 2e-58 60