|
Name : W5S_4172 (W5S_4172) Accession : YP_006285100.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Resistance Product : Membrane protein YjdB Function : - COG functional category : - COG ID : - EC number : - Position : 4493812 - 4495458 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGAAAAATCTAATACCGATGGGCAGGCCACACCTGAACAGCATCACGTTCGTGCTGATATTTTCTGCCTTCATTACCCT GGCCCAGAACATCGCCTACTACCGTCAGGCGCTGCAACTGCTGGATATGACAGACTGGAGCACGCTCCTCTTCTTTCTCA GCATGCCTGTGGTGATTTTCGCAGTGCTGAATATTCTTTTCACGCTGCTGGCAGCCCCTTATCTACGTAAGGCCGTCATT GTTTTCTTTTTGCTGACCGGTGCCGCCGCGCAATACTTTATGCTGAACTACGGCATCATCATTGACCGCACCATGATCCA AAACCTCGTCGAGACAACGGCCAGCGAGTCATTTTCGCTGCTTACGCCGCAGCTTGTCGCCTGGGTATTCTTTCTTGGCG TCATCCCCGCCGTGCTCGCCATCTGGATAAAAATAAAGCCCGCCAAGCCGACGACCCTCTATATTGGCATGCGCGTTCTC AGCGTCATTATTTCGTTATTCGCTATTTTATCTGTCGCGGCCTTCTTTTATAAAGATTACGCCTCATTCATGCGTAATAA CAAAGAGTTGGTAAAAGCGATTACGCCCAGCAATATTGTGGCAGCCAGCCTGTCCTACCATAAGCATAGCGCGCTAGCTA ATTTACCCCTGGAGCAGATTGGCCTGGATGCCCACAAGGTTTCGCCACCGTCCCCAACGGCAAAAAAGAATCTGGTTATT CTGGTCGTGGGAGAAACCTCGCGCGCACAAAACTTTTCACTGGGAGGCTATGGGAAGGAAACCAATCCGCTACTGGCAAA GGACAACGTGGTTTATTTTGAAAACACGTCATCATGTGGCACATCAACAGGCGTTTCCGTTCCCTGCATGTTTTCTAACA TGCCGCGCCAAAGCTTTAATGGTGACGTAGCCAGCCATCAAGAAGGGCTGCTGGATATATTACAACGGGCAAAGGTTAAC GTGCTCTGGCAGGAAAATGACGGCGGTTGCAAAGATGTCTGTACCCGTGTACCAACGGTTGATGTGACATCGCTGAAACT ACCAGGGCTATGCACCAACGGCGAGTGCCACGATGAAGCGTTATTCCACGGTGTAGAAGACTATATTAACAAGCTCGACA ACGACGGGATTATTGTATTACATACGATAGGCAGCCACGGCCCGAGCTATTACCAACGTTACCCTGACGCCTTTAAGAAA TTTACCCCAACCTGTGATACCAATCAGATTCAAACCTGTACGCAGGAAGCGCTGACTAACACGTATGACAACACGATCCT GTATGTCGATTTTTTTCTGGATAAGACGATCAATTTACTGAAACAGCATCGGGATAAATTTAATACCTCACTGGTTTACC TATCTGACCACGGCGAGTCGTTAGGCGAGAACGGTATCTACCTGCACAGCATGCCCTACTCTATTGCGCCCAAACAGCAA ACGCATGTGCCAATGTTGATTTGGTTATCAACGGGTTACCAACAGCAACAGGCGATTCAGGACACCTGTCTGCGTCAGAG TGCGAAGCAGCAGGATTACTCGCAAGATAATCTTTTCCATACCATACTGGGGATGTTTACTATCGCTACGAAAGAATATC AGCCTCAGCTTGATATCCTTCAGCCGTGCAGGGATAAGGCAACATGA Protein sequence : MKNLIPMGRPHLNSITFVLIFSAFITLAQNIAYYRQALQLLDMTDWSTLLFFLSMPVVIFAVLNILFTLLAAPYLRKAVI VFFLLTGAAAQYFMLNYGIIIDRTMIQNLVETTASESFSLLTPQLVAWVFFLGVIPAVLAIWIKIKPAKPTTLYIGMRVL SVIISLFAILSVAAFFYKDYASFMRNNKELVKAITPSNIVAASLSYHKHSALANLPLEQIGLDAHKVSPPSPTAKKNLVI LVVGETSRAQNFSLGGYGKETNPLLAKDNVVYFENTSSCGTSTGVSVPCMFSNMPRQSFNGDVASHQEGLLDILQRAKVN VLWQENDGGCKDVCTRVPTVDVTSLKLPGLCTNGECHDEALFHGVEDYINKLDNDGIIVLHTIGSHGPSYYQRYPDAFKK FTPTCDTNQIQTCTQEALTNTYDNTILYVDFFLDKTINLLKQHRDKFNTSLVYLSDHGESLGENGIYLHSMPYSIAPKQQ THVPMLIWLSTGYQQQQAIQDTCLRQSAKQQDYSQDNLFHTILGMFTIATKEYQPQLDILQPCRDKAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1140 | NP_286675.1 | hypothetical protein | Not tested | TAI | Protein | 4e-96 | 42 |
| Z1579 | NP_287083.1 | hypothetical protein | Not tested | TAI | Protein | 4e-96 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_4172 | YP_006285100.1 | Membrane protein YjdB | BAC0485 | Protein | 0.0 | 99 |
