Gene Information

Name : W5S_3957 (W5S_3957)
Accession : YP_006284892.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : VgrG protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4274487 - 4276319 bp
Length : 1833 bp
Strand : +
Note : -

DNA sequence :
GTGGCCAACAGTACAGGATTGCAGTTCACCGTGAAGGTCGGCGCGTTGCCGGCCTCGACGTTTGCGGTGGTCGATTTTCA
GCTCAGCGAGGCGCTTAACCAGTCGTTTTCCCTGTCCCTCAATCTGGCCAGTGCCCTGCCGGATGTGGATTTTGGCGCGG
TGCTGGACCAGCCCTGTGAGCTGCTGATTTGGTTCGAAGGCGAGTTGAAGCGACGGGTGAGCGGGATAATCAGCGGCTTT
GCCCAGGGTGACACCGGCTTTCGCCGCACCCGCTATCAGGCGGAAGTGCGTCCGGCGTTGTGGCGACTCGGCTTACGCAC
CAACGCCCGCATTTTTCAGGCGCAGAAGCCAGAGGCGATTATCGGCACCCTGCTGGAAGAAGCCGGGATTACCGACTACG
CCTTCTCGTTACGTCATGACCATGCCCCGCGTGAATACTGCGTGCAGTACCGGGAAAGTGATTTGGCGTTTGTCACCCGA
CTGGCCGCCGAGGAAGGCTTGTACTTCTTCCACGAGTTTGAGGAAGGCAAACACCGGGTGGTCTTTGCCGACGATGCCGG
CGCACTGGCCAAAGGCCCTGAACTGTTCTTCAACCTCGCCACGCAGGGGCTGAGTGAAGGCGAATATGTCCACCGTTTCC
GCTACGCCGAGCGGGTCAGCATCGCCGAGGTGGCGCTCAAGGACTACAGCTTCAAAACCCCGGCCTATGGCCTGCTGCAC
AAGAAGATGAGCAGCGAACTGGCACACCAGCGCGAAAGCTATCAGCACTTTGACTACCCCGGACGCTTTAAAAAAGACCC
GAGCGGCAAGGCGTTCAGCCGCTACCGGCTGGAGGCGTTACGGGCGAATGCCATCACTGGCGCGGGGGACTCCAACGCGG
CGATGCTGATGCCGGGCAACAGTTTCATGCTCACCGAACACCCCAACCTGCCCCTCAACACTGGCTGGCAAGTGGTTGCC
ATCACCCACAGCGGACAGCAACCGCAGGCGCTGGAAGAAGAAAGCGGCGGCGAACCGACCACCTACAGCAACAGCTTTGA
GGTCATCAGCGCCAAAACCACCTGGCGTGCGGACCTGCCGTACAAGCCGATGGTCGATGGCCCGCAGATTGCGACAGTGG
TGGGGCCGGCCGGTGAAGAAATCTACTGTGACGAATACGGCCGCATCAAGCTGCAATTCCCGTGGGACCGCTACGGGGCG
AGTGACGACCAGAGCTCCTGCTGGGTGCGGGTGAGTCAGGGCTGGGCGGGCGGCCAGTACGGGCTGATAGCCATCCCGCG
CATCGGCCATGAAGTGATTGTCAGCTTCCTCGAAGGCGACCCGGACCAGCCGATAGTGACCGGCAGGACCTTTCATGCGA
CTAACCGCCCTCCTTATGAGTTGCCCACCCACAAGACGCGTACCGTTCTTCGTTCAAGAACGCATAAAGGAAAAGGCTTT
AACGAACTGCGCTTTGAAGATCAGTCTGGACAGGAAGAAGTATTTATCCACGCCCAGAAGGACATGAACACCGTGGTGCT
CAATAACCGCAGCACAAAGGTGAACATCGACCACAGTGAAAATGTGGGTCGTCATCAGACAATCATGGTTGGCGAAAATC
AGGGAACAGAAATCAGAGGCACCCAGAGGATTACGGTGGAAAAGGGCCGCAAGACCGAAATCACCACGACTGAAGAGCTG
ACCGTAACCGGAGATATTACCGTGCTGTCAGCCAGCGGCACGATCAAATTATCTACCGCTGGTGGATATATCTCTATTGA
TAATGCTGGCGATATCAACATTGTCGGCAACCACCTGATGCTAAATGGCGTACGCATCGATTTGAACCAGTAG

Protein sequence :
MANSTGLQFTVKVGALPASTFAVVDFQLSEALNQSFSLSLNLASALPDVDFGAVLDQPCELLIWFEGELKRRVSGIISGF
AQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQAQKPEAIIGTLLEEAGITDYAFSLRHDHAPREYCVQYRESDLAFVTR
LAAEEGLYFFHEFEEGKHRVVFADDAGALAKGPELFFNLATQGLSEGEYVHRFRYAERVSIAEVALKDYSFKTPAYGLLH
KKMSSELAHQRESYQHFDYPGRFKKDPSGKAFSRYRLEALRANAITGAGDSNAAMLMPGNSFMLTEHPNLPLNTGWQVVA
ITHSGQQPQALEEESGGEPTTYSNSFEVISAKTTWRADLPYKPMVDGPQIATVVGPAGEEIYCDEYGRIKLQFPWDRYGA
SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNRPPYELPTHKTRTVLRSRTHKGKGF
NELRFEDQSGQEEVFIHAQKDMNTVVLNNRSTKVNIDHSENVGRHQTIMVGENQGTEIRGTQRITVEKGRKTEITTTEEL
TVTGDITVLSASGTIKLSTAGGYISIDNAGDINIVGNHLMLNGVRIDLNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 6e-150 52
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-122 48
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 1e-122 48