Gene Information

Name : W5S_3922 (W5S_3922)
Accession : YP_006284857.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4232908 - 4234224 bp
Length : 1317 bp
Strand : -
Note : -

DNA sequence :
ATGGTGGACTATCAGGGTAAAAAAGTCGTCATTATCGGGTTGGGTCTGACCGGGCTCTCCTGTGTTGATTTCTTTCTCGC
GCGTGGTGTTGTACCGCGTGTGGTGGATACCCGTATCAGTCCACCGGGCTTGGATAAGCTGCCGGAGCAGGTGGAACGGC
ATCTCGGTAGCCTCAATGAAGACTGGCTGATGAATGTGGATTTGATCGTCGCCAGCCCCGGCGTTGCATTGGCGACGCCG
ATTCTGTGTGACGCTGCTGATGCTGGTATTGAGATTGTTGGCGATATCGAACTGTTCTGTCGTGAAGCACAGGCACCTAT
TGTGGCGATTACCGGTTCGAACGGCAAAAGTACGGTGACGACGTTGGTCGGTGAAATGGCGCGCGCTGCAGGTTGGCAGG
TGGGCGTCGGTGGCAACATTGGTCTCCCTGCGTTGCAGTTGCTGGAACAGCCCGCTCAGCTTTATGTCCTGGAGTTGTCG
AGTTTCCAATTGGAAACGACGAGTAGCCTGCACGCCGCTGCGGCTACCATTCTGAACGTAACGGAAGATCACACCAACCG
TTACCCGTTTGGCCTACAGCAGTATCGTGCAGCGAAATTGCGGATTTATGAACATGCGGACCTGTGCGTTGTGAACGCAG
ACGATGCGTTGACCATGCCGATTCGCGGTGCAGATGTGCGCTGCCGCAGTTTTGGTGTTGATGTCGGTGATTATCATCTT
AACCGTCAGCAGGGCGAAACCTGGCTGCGGGTGAACGGTGAACGAGTGCTCAACACCCGTGAAATCAAGCTTGTCGGGCA
ACATAATTACACGAACGCATTGGCGGCGCTGGCGCTGGCTGATGCTGTGAAGATCCCTCGGGCTTCTGCACTGACGGCAT
TGACGGCATTTACCGGGCTACCGCATCGCTTCCAGATGGCCTTTGAGCGCGATGGCGTGCGGTGGATCAATGATTCTAAA
GCCACCAATGTGGGCAGCACCGAAGCGGCATTAAGCGGTTTGACCGTCGACGGCACGTTGCATCTGCTGTTAGGTGGTGA
TGGAAAATCTGCCGACTTCTCGCCGCTGGTGCCCTATTTTCAGGGGGAGCGTATTCGTTTGTATTGCTTTGGTCGTGATG
CTGCACAACTGGCTGCATTACGCCCGGAAATTGCCGAACAGACAGAAACAATGGAACAGGCGATGCGCGTCATCGCTGAA
CGCATTAAGCCGGGTGACATGGTGCTGCTGTCGCCAGCTTGCGCAAGCCTGGATCAGTTTCGTAGTTTTGAACAGCGAGG
CGACGAATTTGCTCGCTTGGCGAAGGAATTAGGTTGA

Protein sequence :
MVDYQGKKVVIIGLGLTGLSCVDFFLARGVVPRVVDTRISPPGLDKLPEQVERHLGSLNEDWLMNVDLIVASPGVALATP
ILCDAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMARAAGWQVGVGGNIGLPALQLLEQPAQLYVLELS
SFQLETTSSLHAAAATILNVTEDHTNRYPFGLQQYRAAKLRIYEHADLCVVNADDALTMPIRGADVRCRSFGVDVGDYHL
NRQQGETWLRVNGERVLNTREIKLVGQHNYTNALAALALADAVKIPRASALTALTAFTGLPHRFQMAFERDGVRWINDSK
ATNVGSTEAALSGLTVDGTLHLLLGGDGKSADFSPLVPYFQGERIRLYCFGRDAAQLAALRPEIAEQTETMEQAMRVIAE
RIKPGDMVLLSPACASLDQFRSFEQRGDEFARLAKELG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 2e-50 41
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 2e-50 41