Gene Information

Name : W5S_3873 (W5S_3873)
Accession : YP_006284808.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Ferric enterobactin ABC transporter, ATP-binding protein FepC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4167729 - 4168559 bp
Length : 831 bp
Strand : +
Note : -

DNA sequence : 
ATGACACACCTCTTACATGCTAACCACCTAACCCTCGCCTATGACAAAAAAATCATTGCGGAACATCTGAGTCTGTCAAT
TCCAGATAACCAATTCAGCGTGATCGTCGGGCCCAATGCGTGTGGAAAATCGACGCTGCTGCGCGCGCTGTGCCGATTAC
TGAAACCGTTAGCAGGGGAAGTGATTTTAGACGGCAATAATATCCATCATCTGCCCACTAAAGCGTTAGCCAGACAAATT
GGCTTACTACCGCAGCATGCCGTCGTTCCGGACAACATCACGGTGGCCGAACTGGTATCGCGCGGGCGCTATCCGCATCA
GCGCCTGTTACACACCTGGAACCAGACCGATCAAAAAGTTCTGGAAGAGGCGATGGCGGCGACGAATATTAGCGAGTTGG
CAGAACGCCACGTTGACGAGCTCTCTGGTGGACAGCGCCAGCGGGTCTGGATCGCGATGGTTTTGGCGCAACAAACCCCG
CTTCTTCTGCTGGATGAACCGACAACCTGGCTGGACATCGCGCATCAGATAGACCTGCTCGATCTGTTCTATACACTGCG
GCATCAGCATGGGCGCACGCTGGTGGCCGTGCTGCACGATCTGAATCAGGCCTGCCGCTATGCCGACCATTTGATTGTGA
TGCAGGCCGGACGCATCATGGCAGAAGGAAAGCCTGCCGATATCGTCAATGCCGACCTGATCGAACAGGTATTCGGCATG
ACGAGCCTGATTATCGACGATCCGGTTTCACACACGCCACTCATCGTGCCCTGCGGTCGTCACCACCGCATAGCAGAAGT
GACGACCGCCAGACCACCGTCAATCGAGTGA

Protein sequence : 
MTHLLHANHLTLAYDKKIIAEHLSLSIPDNQFSVIVGPNACGKSTLLRALCRLLKPLAGEVILDGNNIHHLPTKALARQI
GLLPQHAVVPDNITVAELVSRGRYPHQRLLHTWNQTDQKVLEEAMAATNISELAERHVDELSGGQRQRVWIAMVLAQQTP
LLLLDEPTTWLDIAHQIDLLDLFYTLRHQHGRTLVAVLHDLNQACRYADHLIVMQAGRIMAEGKPADIVNADLIEQVFGM
TSLIIDDPVSHTPLIVPCGRHHRIAEVTTARPPSIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-59 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-59 52
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-59 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-59 52
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-59 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-59 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-56 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-46 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-48 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3873 YP_006284808.1 Ferric enterobactin ABC transporter, ATP-binding protein FepC BAC0164 Protein 3e-46 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3873 YP_006284808.1 Ferric enterobactin ABC transporter, ATP-binding protein FepC VFG0925 Protein 1e-70 60
W5S_3873 YP_006284808.1 Ferric enterobactin ABC transporter, ATP-binding protein FepC VFG1042 Protein 2e-46 49