Gene Information

Name : W5S_3858 (W5S_3858)
Accession : YP_006284793.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Quaternary ammonium compound-resistance protein QacE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4153761 - 4154087 bp
Length : 327 bp
Strand : +
Note : -

DNA sequence : 
ATGTTAAACGGATTCTTATGGTTGGCGCTTTCCATTGGTTCAGAAATTACCGGCACCTCGATGATCAAAAAAACCGATGG
ATTTAAAAGACGCACGCCTTCCGTTATCGTTATTCTCGCTTACTGCCTCTGCTATTTTTCATTAACCCGCGCAATGGGCT
ATTTACCCGTGGGCGTGGCCTACTCGCTGTGGTGCGGGTTTGGCATCGTCGGCGTAACATTTATTTCGATGCTACTTTAT
AAACAAAAACCAGATTTACCTGCGGTATTTTCAATGGTTCTGATTATCAGCGGGGGCATTATCATGAACCTCTATTCAAA
TATGTAA

Protein sequence : 
MLNGFLWLALSIGSEITGTSMIKKTDGFKRRTPSVIVILAYCLCYFSLTRAMGYLPVGVAYSLWCGFGIVGVTFISMLLY
KQKPDLPAVFSMVLIISGGIIMNLYSNM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 6e-35 81
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 5e-17 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3858 YP_006284793.1 Quaternary ammonium compound-resistance protein QacE CP004022.1.gene1549. Protein 8e-19 43
W5S_3858 YP_006284793.1 Quaternary ammonium compound-resistance protein QacE BAC0324 Protein 7e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3858 YP_006284793.1 Quaternary ammonium compound-resistance protein QacE VFG1586 Protein 3e-35 81
W5S_3858 YP_006284793.1 Quaternary ammonium compound-resistance protein QacE VFG1587 Protein 2e-17 44